trnaw-cca-133



Basic Information


Item Value
gene id trnaw-cca-133
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35259288 ~ 35259359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-133
gacctcgtggcgcaatggtagcgtgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-133 True 72 mRNA 0.56 1 35259288 35259359

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-132 NA coding downstream 1224 35257993 ~ 35258064 (-)
trnaw-cca-131 NA coding downstream 3155 35256062 ~ 35256133 (-)
trnaw-cca-130 NA coding downstream 4452 35254765 ~ 35254836 (-)
trnaw-cca-129 NA coding downstream 5749 35253468 ~ 35253539 (-)
trnaw-cca-128 NA coding downstream 7046 35252171 ~ 35252242 (-)
trnaw-cca-134 NA coding upstream 1224 35260583 ~ 35260654 (-)
trnaw-cca-135 NA coding upstream 2521 35261880 ~ 35261951 (-)
trnaw-cca-136 NA coding upstream 4066 35263425 ~ 35263496 (-)
trnaw-cca-137 NA coding upstream 5618 35264977 ~ 35265048 (-)
trnaw-cca-138 NA coding upstream 7176 35266535 ~ 35266606 (-)
G2132010 NA non-coding downstream 2214 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 133565 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 145351 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 146839 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 190149 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 75519 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 97065 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 126565 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 137658 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 148569 35407928 ~ 35408146 (-)
G2131641 NA other downstream 741159 34516522 ~ 34518129 (-)
G2131621 NA other downstream 773112 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1191215 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1192623 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 746130 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 764421 36023714 ~ 36025735 (-)
G2132971 NA other upstream 964854 36224213 ~ 36225379 (-)
G2132966 NA other upstream 976156 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1003643 36263002 ~ 36263330 (-)

Expression



Co-expression Network