trnaw-cca-142



Basic Information


Item Value
gene id trnaw-cca-142
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35272248 ~ 35272319 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-142
gacctcgtggcgcaatggtagcgcatctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-142 True 72 mRNA 0.56 1 35272248 35272319

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-141 NA coding downstream 1483 35270694 ~ 35270765 (-)
trnaw-cca-140 NA coding downstream 2787 35269390 ~ 35269461 (-)
trnaw-cca-139 NA coding downstream 4338 35267839 ~ 35267910 (-)
trnaw-cca-138 NA coding downstream 5642 35266535 ~ 35266606 (-)
trnaw-cca-137 NA coding downstream 7200 35264977 ~ 35265048 (-)
trnaw-cca-143 NA coding upstream 1486 35273805 ~ 35273876 (-)
trnaw-cca-144 NA coding upstream 3045 35275364 ~ 35275435 (-)
trnaw-cca-145 NA coding upstream 4349 35276668 ~ 35276739 (-)
trnaw-cca-146 NA coding upstream 5894 35278213 ~ 35278284 (-)
trnaw-cca-147 NA coding upstream 7452 35279771 ~ 35279842 (-)
G2132010 NA non-coding downstream 15174 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 146525 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 158311 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 159799 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 203109 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 62559 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 84105 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 113605 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 124698 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 135609 35407928 ~ 35408146 (-)
G2131641 NA other downstream 754119 34516522 ~ 34518129 (-)
G2131621 NA other downstream 786072 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1204175 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1205583 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 733170 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 751461 36023714 ~ 36025735 (-)
G2132971 NA other upstream 951894 36224213 ~ 36225379 (-)
G2132966 NA other upstream 963196 36235515 ~ 36249775 (-)
G2133007 NA other upstream 990683 36263002 ~ 36263330 (-)

Expression



Co-expression Network