trnaw-cca-144



Basic Information


Item Value
gene id trnaw-cca-144
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35275364 ~ 35275435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-144
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-144 True 72 mRNA 0.57 1 35275364 35275435

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-143 NA coding downstream 1488 35273805 ~ 35273876 (-)
trnaw-cca-142 NA coding downstream 3045 35272248 ~ 35272319 (-)
trnaw-cca-141 NA coding downstream 4599 35270694 ~ 35270765 (-)
trnaw-cca-140 NA coding downstream 5903 35269390 ~ 35269461 (-)
trnaw-cca-139 NA coding downstream 7454 35267839 ~ 35267910 (-)
trnaw-cca-145 NA coding upstream 1233 35276668 ~ 35276739 (-)
trnaw-cca-146 NA coding upstream 2778 35278213 ~ 35278284 (-)
trnaw-cca-147 NA coding upstream 4336 35279771 ~ 35279842 (-)
trnaw-cca-148 NA coding upstream 5640 35281075 ~ 35281146 (-)
trnaw-cca-149 NA coding upstream 7189 35282624 ~ 35282695 (-)
G2132010 NA non-coding downstream 18290 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 149641 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 161427 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 162915 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 206225 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 59443 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 80989 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 110489 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 121582 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 132493 35407928 ~ 35408146 (-)
G2131641 NA other downstream 757235 34516522 ~ 34518129 (-)
G2131621 NA other downstream 789188 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1207291 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1208699 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 730054 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 748345 36023714 ~ 36025735 (-)
G2132971 NA other upstream 948778 36224213 ~ 36225379 (-)
G2132966 NA other upstream 960080 36235515 ~ 36249775 (-)
G2133007 NA other upstream 987567 36263002 ~ 36263330 (-)

Expression



Co-expression Network