trnaw-cca-152



Basic Information


Item Value
gene id trnaw-cca-152
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35287041 ~ 35287112 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-152
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-152 True 72 mRNA 0.57 1 35287041 35287112

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-151 NA coding downstream 1484 35285486 ~ 35285557 (-)
trnaw-cca-150 NA coding downstream 2788 35284182 ~ 35284253 (-)
trnaw-cca-149 NA coding downstream 4346 35282624 ~ 35282695 (-)
trnaw-cca-148 NA coding downstream 5895 35281075 ~ 35281146 (-)
trnaw-cca-147 NA coding downstream 7199 35279771 ~ 35279842 (-)
trnaw-cca-153 NA coding upstream 1491 35288603 ~ 35288674 (-)
trnaw-cca-154 NA coding upstream 4093 35291205 ~ 35291276 (-)
trnaw-cca-155 NA coding upstream 6696 35293808 ~ 35293879 (-)
trnaw-cca-156 NA coding upstream 8255 35295367 ~ 35295438 (-)
trnaw-cca-157 NA coding upstream 10857 35297969 ~ 35298040 (-)
G2132010 NA non-coding downstream 29967 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 161318 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 173104 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 174592 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 217902 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 47766 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 69312 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 98812 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 109905 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 120816 35407928 ~ 35408146 (-)
G2131641 NA other downstream 768912 34516522 ~ 34518129 (-)
G2131621 NA other downstream 800865 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1218968 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1220376 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 718377 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 736668 36023714 ~ 36025735 (-)
G2132971 NA other upstream 937101 36224213 ~ 36225379 (-)
G2132966 NA other upstream 948403 36235515 ~ 36249775 (-)
G2133007 NA other upstream 975890 36263002 ~ 36263330 (-)

Expression



Co-expression Network