trnaw-cca-157



Basic Information


Item Value
gene id trnaw-cca-157
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35297969 ~ 35298040 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-157
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-157 True 72 mRNA 0.57 1 35297969 35298040

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-156 NA coding downstream 2531 35295367 ~ 35295438 (-)
trnaw-cca-155 NA coding downstream 4090 35293808 ~ 35293879 (-)
trnaw-cca-154 NA coding downstream 6693 35291205 ~ 35291276 (-)
trnaw-cca-153 NA coding downstream 9295 35288603 ~ 35288674 (-)
trnaw-cca-152 NA coding downstream 10857 35287041 ~ 35287112 (-)
trnaw-cca-158 NA coding upstream 1488 35299528 ~ 35299599 (-)
trnaw-cca-159 NA coding upstream 3047 35301087 ~ 35301158 (-)
trnaw-cca-160 NA coding upstream 4606 35302646 ~ 35302717 (-)
trnaw-cca-161 NA coding upstream 6168 35304208 ~ 35304279 (-)
trnaw-cca-162 NA coding upstream 7727 35305767 ~ 35305838 (-)
G2132010 NA non-coding downstream 40895 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 172246 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 184032 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 185520 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 228830 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 36838 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 58384 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 87884 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 98977 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 109888 35407928 ~ 35408146 (-)
G2131641 NA other downstream 779840 34516522 ~ 34518129 (-)
G2131621 NA other downstream 811793 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1229896 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1231304 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 707449 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 725740 36023714 ~ 36025735 (-)
G2132971 NA other upstream 926173 36224213 ~ 36225379 (-)
G2132966 NA other upstream 937475 36235515 ~ 36249775 (-)
G2133007 NA other upstream 964962 36263002 ~ 36263330 (-)

Expression



Co-expression Network