trnaw-cca-171



Basic Information


Item Value
gene id trnaw-cca-171
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35319825 ~ 35319896 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-171
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-171 True 72 mRNA 0.57 1 35319825 35319896

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-170 NA coding downstream 1491 35318263 ~ 35318334 (-)
trnaw-cca-169 NA coding downstream 3053 35316701 ~ 35316772 (-)
trnaw-cca-168 NA coding downstream 4615 35315139 ~ 35315210 (-)
trnaw-cca-167 NA coding downstream 6177 35313577 ~ 35313648 (-)
trnaw-cca-166 NA coding downstream 7739 35312015 ~ 35312086 (-)
trnaw-cca-172 NA coding upstream 1492 35321388 ~ 35321459 (-)
trnaw-cca-173 NA coding upstream 3054 35322950 ~ 35323021 (-)
trnaw-cca-174 NA coding upstream 4616 35324512 ~ 35324583 (-)
trnaw-cca-175 NA coding upstream 6178 35326074 ~ 35326145 (-)
trnaw-cca-176 NA coding upstream 7740 35327636 ~ 35327707 (-)
G2132010 NA non-coding downstream 62751 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 194102 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 205888 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 207376 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 250686 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 14982 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 36528 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 66028 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 77121 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 88032 35407928 ~ 35408146 (-)
G2131641 NA other downstream 801696 34516522 ~ 34518129 (-)
G2131621 NA other downstream 833649 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1251752 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1253160 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 685593 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 703884 36023714 ~ 36025735 (-)
G2132971 NA other upstream 904317 36224213 ~ 36225379 (-)
G2132966 NA other upstream 915619 36235515 ~ 36249775 (-)
G2133007 NA other upstream 943106 36263002 ~ 36263330 (-)

Expression



Co-expression Network