trnaw-cca-173



Basic Information


Item Value
gene id trnaw-cca-173
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35322950 ~ 35323021 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-173
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-173 True 72 mRNA 0.57 1 35322950 35323021

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-172 NA coding downstream 1491 35321388 ~ 35321459 (-)
trnaw-cca-171 NA coding downstream 3054 35319825 ~ 35319896 (-)
trnaw-cca-170 NA coding downstream 4616 35318263 ~ 35318334 (-)
trnaw-cca-169 NA coding downstream 6178 35316701 ~ 35316772 (-)
trnaw-cca-168 NA coding downstream 7740 35315139 ~ 35315210 (-)
trnaw-cca-174 NA coding upstream 1491 35324512 ~ 35324583 (-)
trnaw-cca-175 NA coding upstream 3053 35326074 ~ 35326145 (-)
trnaw-cca-176 NA coding upstream 4615 35327636 ~ 35327707 (-)
trnaw-cca-177 NA coding upstream 6177 35329198 ~ 35329269 (-)
trnaw-cca-178 NA coding upstream 7739 35330760 ~ 35330831 (-)
G2132010 NA non-coding downstream 65876 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 197227 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 209013 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 210501 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 253811 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 11857 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 33403 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 62903 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 73996 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 84907 35407928 ~ 35408146 (-)
G2131641 NA other downstream 804821 34516522 ~ 34518129 (-)
G2131621 NA other downstream 836774 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1254877 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1256285 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 682468 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 700759 36023714 ~ 36025735 (-)
G2132971 NA other upstream 901192 36224213 ~ 36225379 (-)
G2132966 NA other upstream 912494 36235515 ~ 36249775 (-)
G2133007 NA other upstream 939981 36263002 ~ 36263330 (-)

Expression



Co-expression Network