trnaw-cca-180



Basic Information


Item Value
gene id trnaw-cca-180
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35333884 ~ 35333955 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-180
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-180 True 72 mRNA 0.57 1 35333884 35333955

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-179 NA coding downstream 1491 35332322 ~ 35332393 (-)
trnaw-cca-178 NA coding downstream 3053 35330760 ~ 35330831 (-)
trnaw-cca-177 NA coding downstream 4615 35329198 ~ 35329269 (-)
trnaw-cca-176 NA coding downstream 6177 35327636 ~ 35327707 (-)
trnaw-cca-175 NA coding downstream 7739 35326074 ~ 35326145 (-)
trnaw-cca-181 NA coding upstream 1488 35335443 ~ 35335514 (-)
trnaw-cca-182 NA coding upstream 3050 35337005 ~ 35337076 (-)
trnaw-cca-183 NA coding upstream 4609 35338564 ~ 35338635 (-)
trnaw-cca-184 NA coding upstream 6168 35340123 ~ 35340194 (-)
trnaw-cca-185 NA coding upstream 7727 35341682 ~ 35341753 (-)
G2132010 NA non-coding downstream 76810 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 208161 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 219947 35113693 ~ 35113937 (-)
G2131974 NA non-coding downstream 221435 35111996 ~ 35112449 (-)
G2131950 NA non-coding downstream 264745 35068518 ~ 35069139 (-)
G2132016 NA non-coding upstream 923 35334878 ~ 35335159 (-)
G2132018 NA non-coding upstream 22469 35356424 ~ 35356686 (-)
G2132074 NA non-coding upstream 51969 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 63062 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 73973 35407928 ~ 35408146 (-)
G2131641 NA other downstream 815755 34516522 ~ 34518129 (-)
G2131621 NA other downstream 847708 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1265811 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1267219 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 671534 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 689825 36023714 ~ 36025735 (-)
G2132971 NA other upstream 890258 36224213 ~ 36225379 (-)
G2132966 NA other upstream 901560 36235515 ~ 36249775 (-)
G2133007 NA other upstream 929047 36263002 ~ 36263330 (-)

Expression



Co-expression Network