trnaw-cca-196



Basic Information


Item Value
gene id trnaw-cca-196
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35360393 ~ 35360464 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaw-cca-196
gacctcgtggcgcaatggtagcgcgtctgactccagatcagaaggttgcgtgttcaactcacgtcgtggtca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaw-cca-196 True 72 mRNA 0.57 1 35360393 35360464

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-195 NA coding downstream 1488 35358834 ~ 35358905 (-)
trnaw-cca-194 NA coding downstream 3047 35357275 ~ 35357346 (-)
trnaw-cca-193 NA coding downstream 4610 35355712 ~ 35355783 (-)
trnaw-cca-192 NA coding downstream 6169 35354153 ~ 35354224 (-)
trnaw-cca-191 NA coding downstream 9282 35351040 ~ 35351111 (-)
trnaw-cca-197 NA coding upstream 1488 35361952 ~ 35362023 (-)
trnaw-cca-198 NA coding upstream 3047 35363511 ~ 35363582 (-)
trnaw-cca-199 NA coding upstream 4606 35365070 ~ 35365141 (-)
trnaw-cca-200 NA coding upstream 6160 35366624 ~ 35366695 (-)
LOC110508240 LOC106568781 coding upstream 30542 35391006 ~ 35429299 (-)
G2132018 NA non-coding downstream 3707 35356424 ~ 35356686 (-)
G2132016 NA non-coding downstream 25234 35334878 ~ 35335159 (-)
G2132010 NA non-coding downstream 103319 35256687 ~ 35257074 (-)
G2131990 NA non-coding downstream 234670 35123400 ~ 35125723 (-)
G2131976 NA non-coding downstream 246456 35113693 ~ 35113937 (-)
G2132074 NA non-coding upstream 25460 35385924 ~ 35386152 (-)
G2132083 NA non-coding upstream 36553 35397017 ~ 35397255 (-)
G2132089 NA non-coding upstream 47464 35407928 ~ 35408146 (-)
G2132091 NA non-coding upstream 50009 35410473 ~ 35410862 (-)
G2132106 NA non-coding upstream 87492 35447956 ~ 35448195 (-)
G2131641 NA other downstream 842264 34516522 ~ 34518129 (-)
G2131621 NA other downstream 874217 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1292320 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1293728 34040206 ~ 34066665 (-)
lyrm4 lyrm4 other upstream 645025 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 663316 36023714 ~ 36025735 (-)
G2132971 NA other upstream 863749 36224213 ~ 36225379 (-)
G2132966 NA other upstream 875051 36235515 ~ 36249775 (-)
G2133007 NA other upstream 902538 36263002 ~ 36263330 (-)

Expression



Co-expression Network