LOC110509087 (LOC106588083)


Basic Information

Item Value
gene id LOC110509087
gene name LOC106588083
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35372225 ~ 35384925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590045.2
TTTTTCGACAAGGGAGTATCCCGGAAATAGCTAAGTGTGTGGAGGCGGGGCAGATTTCATTGCTACGCCTGTTTCCTTTCACTGGCACTGCACAGAAGAGATTGTGCAGTTTAGGCGAGAAAATAATGGACCAAAGGCCAACATAGCTATCCACTGTGCAAATCTAGTTGCTGGCCTTCCCAGCTGGCTAACTAATTACCAAGACATCACCAAGATAAATTAACTGAAGACGATAATATTATTTTGTTGTCAATAGTTCACCCCcttcgcgcacacacacatcaacacggCATTGATGGTAATGCATACAAGGAAACAACCGAGACTCAGCGATGGGTGTACCGACCGAAGGGATTCACAGCCCTATCAGACACACAAATCCCAGCCCAAGAGTCAATCTACCACCCTTCACCGTCACGATAAAATGCGAGATGGGTTGTCAGATCCTACACCACCCTACAAAATGCTCCGACACTCTGATGAAAGTCCAGTCAATAAGCACAGTGACGGACAcagcaaaacaaaaacatttcacaCACTCCGAGGCCAAGATGGTGGGACCAGCTGCTCTCCGCAAGAGAATTCTCACAACCACAGCTCCAACTCGCACTCAAATCAAAGCAAGGCGTCAGACACACCTCACGAGCCTGCAGACGACTGGTCGGAGCACATCAGCTCCTCGGGCAAGAAGTACTACTACAACTGCAGGACTGAGGTCTCTCAGTGGGAGAAGCCCAAAGACTGGCTGGAGAGAGAGCAAAGGCAAAAAGACCCGTCTAAGAGGGAGTCCAACACGTTCCCTAAAGACCGGGACTACAGACGAGAGTCTGTGGACACAGCCACCACAAAGAGTACTTCAGGGGACAAGTCGTCCTCCAGCACTGCTCCTTCCCAGTCATCTTCCTCCACCAATCCGGGTCTGAACCAGGCCTCTGGCTCTAACCCcaccccctcctcatcctcctccatgGTCCCCGTGTCCCCCTCTGTCCAATCTCAGGCCTCGGGCTTGCTCCAAGACCCCGCCCTCCTGCGGCAGCTTCTCCCAGCGCTGCAGGCCACCCTGCAGATGAGCAATGGCAGCATGGACATGGCCAAGATCAATGAGGTCCTTGCGGCTGCTGTTACCCAAGCTTCCTTGCAGTCTATGCTTCATAAACTCCTCACTGCTGGACCGTCTGCTTTCAACATCACTGCTCTTCTTTCCCAAGCTGCTCAACACTCCAACCAAGCGGCCCTGCAGGCAAGTCAGTCGCCCATATCACTAACGTCGGACGCCTCCTCGCCCCGCTCATACGTGTCGCCCAGGAATGGCACGCCCCAGACCAACCTCCTTACCCAGAAACCCCTGCTCAGTATGCCACCCGCCACCTCCCAACCAAAGGTTACCCCAGTGAAACCAGGACCAGTTTCTCAGCAGGCTTCAGCAGAGAAACGTCCAGAGGACCCCCGAACTCTCCAACAGCGGAGCAGTCAGGGGAGTCCGCCACAAGGACCTAACAGCAACTCCACCGGCGGCCACTCTGTTCCCAACGCTGCCTCAGGCCTCACCAGCGCTCCCGGCTCCTTCACCCCCTCGCTGGCCTCTCACTTTGACGAGAACCTCGTCAGGCACATCCAGAACTGGCCCGCAGAGCACATCGAGAAGCAGGCAGCACGGTTACGGGAGGATGCCCACAACATGGGCAGTCTCTACATGTCTGAGATCTGCACCGAACTCAAAAACCTCCGATCTTTAGTCAGAGTGTGTGAGATCCAGGCCACGCTGCGGGAACAGAGAATACTGTTCCTGAGACAGCAGAGCAAAGAACTGGACAAGCTGAAGAACCAGAACTCTTACATGGTCTGAGAACCTGTGTGGGAGATGAAAGACGGTGAACCGCTTTAGGCTGCGGGCGAAGCCTGCGACGCGGTCCTCTATGCCCCATGTGCCCCAGTCTGAACACGTCCGTACCGTCATGAACCAGAGGGCGTCTGAGGATACGGACAAGAGACTGGGCCTGTTGAAGACGTCATGGGTTACGCAATGAAGCGTACCACTGCCCAAGCCCCTGAAAAAGTGTAGATTTTGTCTAGGCATCCAAGATGTAAATTGTTCTATGAAACCGCAGGCTAAAATAATACAGAAGCCGTGTTGAGCTTTTCATGGACACCCAAACCAGTGGATTCTGAGAAACCTACAGGTCATACCTTTTTTGTTACCTGATCAACTCGGCTGGCGTCCTTTTGGATTTGAGAAACTGTTGGACTGTGTTTGTTGCGGTTGATAGCCAGTTTTGGTTTGGGAATGCATCTTTTTCTCCTCAGACTTGTGGCTTAACTGAAGTTGAGAGGGAACTGAAGGGACTCCGATTGACTTGAGATGTATGAATCGCCAACTGATTCCAGGAAGACTCAAACGCCAACACTTCTTCAGCATAGACTTGAAGTGGTGCGTCACATTGCAGATAGGATATCGAACAGCCCACAGGTTAACAGCATATTCTTAAAAGCCAACTTTgattccttccagactcatacaGTTGCTTCTATTCAGTGAGGAATCCTGAATTTAGCAGTCCCAGTTCACTGAGTACTTTTTAAAATGTGAGCCGACAAAGATTCTTAGCTGCTTGACATGAGTTGTCTATGACGGTCCACGCTCCCTCCCCCCTGGATGGGAATAGTCTGTAGACTTAGTTACCTGTGACCCCTCTTACGTTGGGCCAGGATACTTCTCAGAACATACTGTCCCATGGCGGAACCTTTAGGTCACCTCCCAGTCCCTATCACGAACCCCCAATGGGATCATGCGATAAAGGGCAACGTTCTCGTCGTCCATGACCTCTGCATCAGAACCCCCCCTTTGATCTGTACTTGATCATTTTCCCCCTCTTCTGCTGAAcgtttgatgtttttttgttttgtaagCTTGTCTGTTTTGTCTTCATCTTGAGTAATTAATTCCTTATGTGCAGTTTCTCTCGAGATTGTGAAAAAAGGGTCTTTAGTTTCACGTGGTTATGTAAAACCTAAATTATTGTTGCACATTATTAATTGCGTTCTTGTGAAGATGatggaagagagggtggagatgATCTTATGTTCATGGGACTCACCTTTCTCTTGGCTATACCAGCTAATCCAGTACAGCACTAGTTAAATGGAGTCCGTAGTTAACGTTCGCTACATTTGTCTTACTGaagttaaactttttttttttaggccTCAGTAATTAAACGTAACTATTTTACACAACAATGCTGTCTCACTCTTTCATATCCACAGACTTAGCTACTCCATCCTCAGACTTCTCCGATCAATCAGTGACATACTGTACCGGCCAAAACTTTGGTCTTCAGAACTGGAGAACTCACTTATCCGATAGTTGGGGATTAGAGGTTTTTGTGAGGATGGGGCGACCATAGCTTTGTATATTATTTCTTAAAAGTATATGAGAATAAAATACATTATTCTACCACA
>XM_021590046.2
TTTTTCGACAAGGGAGTATCCCGGAAATAGCTAAGTGTGTGGAGGCGGGGCAGATTTCATTGCTACGCCTGTTTCCTTTCACTGGCACTGCACAGAAGAGATTGTGCAGTTTAGGCGAGAAAATAATGGACCAAAGGCCAACATAGCTATCCACTGTGCAAATCTAGTTGCTGGCCTTCCCAGCTGGCTAACTAATTACCAAGACATCACCAAGATAAATTAACTGAAGACGATAATATTATTTTGTTGTCAATAGTTCACCCCcttcgcgcacacacacatcaacacggCATTGATGGTAATGCATACAAGGAAACAACCGAGACTCAGCGATGGGTGTACCGACCGAAGGGATTCACAGCCCTATCAGACACACAAATCCCAGCCCAAGAGTCAATCTACCACCCTTCACCGTCACGATAAAATGCGAGATGGGTTGTCAGATCCTACACCACCCTACAAAATGCTCCGACACTCTGATGAAAGTCCAGTCAATAAGCACAGTGACGGACAcagcaaaacaaaaacatttcacaCACTCCGAGGCCAAGATGGTGGGACCAGCTGCTCTCCGCAAGAGAATTCTCACAACCACAGCTCCAACTCGCACTCAAATCAAAGCAAGGCGTCAGACACACCTCACGAGCCTGCAGACGACTGGTCGGAGCACATCAGCTCCTCGGGCAAGAAGTACTACTACAACTGCAGGACTGAGGTCTCTCAGTGGGAGAAGCCCAAAGACTGGCTGGAGAGAGAGCAAAGGCAAAAAGACCCGTCTAAGAGGGAGTCCAACACGTTCCCTAAAGACCGGGACTACAGACGAGAGTCTGTGGACACAGCCACCACAAAGAGTACTTCAGGGGACAAGTCGTCCTCCAGCACTGCTCCTTCCCAGTCATCTTCCTCCACCAATCCGGGTCTGAACCAGGCCTCTGGCTCTAACCCcaccccctcctcatcctcctccatgGTCCCCGTGTCCCCCTCTGTCCAATCTCAGGCCTCGGGCTTGCTCCAAGACCCCGCCCTCCTGCGGCAGCTTCTCCCAGCGCTGCAGGCCACCCTGCAGATGAGCAATGGCAGCATGGACATGGCCAAGATCAATGAGGTCCTTGCGGCTGCTGTTACCCAAGCTTCCTTGCAGTCTATGCTTCATAAACTCCTCACTGCTGGACCGTCTGCTTTCAACATCACTGCTCTTCTTTCCCAAGCTGCTCAACACTCCAACCAAGCGGCCCTGCAGGCAAGTCAGTCGCCCATATCACTAACGTCGGACGCCTCCTCGCCCCGCTCATACGTGTCGCCCAGGAATGGCACGCCCCAGACCAACCTCCTTACCCAGAAACCCCTGCTCAGTATGCCACCCGCCACCTCCCAACCAAAGGTTACCCCAGTGAAACCAGGACCAGTTTCTCAGCAGGCTTCAGCAGAGAAACGTCCAGAGGACCCCCGAACTCTCCAACAGCGGAGTCAGGGGAGTCCGCCACAAGGACCTAACAGCAACTCCACCGGCGGCCACTCTGTTCCCAACGCTGCCTCAGGCCTCACCAGCGCTCCCGGCTCCTTCACCCCCTCGCTGGCCTCTCACTTTGACGAGAACCTCGTCAGGCACATCCAGAACTGGCCCGCAGAGCACATCGAGAAGCAGGCAGCACGGTTACGGGAGGATGCCCACAACATGGGCAGTCTCTACATGTCTGAGATCTGCACCGAACTCAAAAACCTCCGATCTTTAGTCAGAGTGTGTGAGATCCAGGCCACGCTGCGGGAACAGAGAATACTGTTCCTGAGACAGCAGAGCAAAGAACTGGACAAGCTGAAGAACCAGAACTCTTACATGGTCTGAGAACCTGTGTGGGAGATGAAAGACGGTGAACCGCTTTAGGCTGCGGGCGAAGCCTGCGACGCGGTCCTCTATGCCCCATGTGCCCCAGTCTGAACACGTCCGTACCGTCATGAACCAGAGGGCGTCTGAGGATACGGACAAGAGACTGGGCCTGTTGAAGACGTCATGGGTTACGCAATGAAGCGTACCACTGCCCAAGCCCCTGAAAAAGTGTAGATTTTGTCTAGGCATCCAAGATGTAAATTGTTCTATGAAACCGCAGGCTAAAATAATACAGAAGCCGTGTTGAGCTTTTCATGGACACCCAAACCAGTGGATTCTGAGAAACCTACAGGTCATACCTTTTTTGTTACCTGATCAACTCGGCTGGCGTCCTTTTGGATTTGAGAAACTGTTGGACTGTGTTTGTTGCGGTTGATAGCCAGTTTTGGTTTGGGAATGCATCTTTTTCTCCTCAGACTTGTGGCTTAACTGAAGTTGAGAGGGAACTGAAGGGACTCCGATTGACTTGAGATGTATGAATCGCCAACTGATTCCAGGAAGACTCAAACGCCAACACTTCTTCAGCATAGACTTGAAGTGGTGCGTCACATTGCAGATAGGATATCGAACAGCCCACAGGTTAACAGCATATTCTTAAAAGCCAACTTTgattccttccagactcatacaGTTGCTTCTATTCAGTGAGGAATCCTGAATTTAGCAGTCCCAGTTCACTGAGTACTTTTTAAAATGTGAGCCGACAAAGATTCTTAGCTGCTTGACATGAGTTGTCTATGACGGTCCACGCTCCCTCCCCCCTGGATGGGAATAGTCTGTAGACTTAGTTACCTGTGACCCCTCTTACGTTGGGCCAGGATACTTCTCAGAACATACTGTCCCATGGCGGAACCTTTAGGTCACCTCCCAGTCCCTATCACGAACCCCCAATGGGATCATGCGATAAAGGGCAACGTTCTCGTCGTCCATGACCTCTGCATCAGAACCCCCCCTTTGATCTGTACTTGATCATTTTCCCCCTCTTCTGCTGAAcgtttgatgtttttttgttttgtaagCTTGTCTGTTTTGTCTTCATCTTGAGTAATTAATTCCTTATGTGCAGTTTCTCTCGAGATTGTGAAAAAAGGGTCTTTAGTTTCACGTGGTTATGTAAAACCTAAATTATTGTTGCACATTATTAATTGCGTTCTTGTGAAGATGatggaagagagggtggagatgATCTTATGTTCATGGGACTCACCTTTCTCTTGGCTATACCAGCTAATCCAGTACAGCACTAGTTAAATGGAGTCCGTAGTTAACGTTCGCTACATTTGTCTTACTGaagttaaactttttttttttaggccTCAGTAATTAAACGTAACTATTTTACACAACAATGCTGTCTCACTCTTTCATATCCACAGACTTAGCTACTCCATCCTCAGACTTCTCCGATCAATCAGTGACATACTGTACCGGCCAAAACTTTGGTCTTCAGAACTGGAGAACTCACTTATCCGATAGTTGGGGATTAGAGGTTTTTGTGAGGATGGGGCGACCATAGCTTTGTATATTATTTCTTAAAAGTATATGAGAATAAAATACATTATTCTACCACA

Function

NR:

description
WW domain-containing adapter protein with coiled-coil-like isoform X2

GO: NA

KEGG:

id description
K23884 WAC; WW domain-containing adapter protein with coiled-coil

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590045.2 False 3462 mRNA 0.49 13 35372225 35384925
XM_021590046.2 True 3459 mRNA 0.49 13 35372225 35384925

Neighbor

gene id symbol gene type direction distance location
trnak-uuu-285 NA coding upstream 5289 35366864 ~ 35366936 (+)
trnak-uuu-284 NA coding upstream 6843 35365310 ~ 35365382 (+)
trnak-uuu-283 NA coding upstream 8402 35363751 ~ 35363823 (+)
trnak-uuu-282 NA coding upstream 9961 35362192 ~ 35362264 (+)
trnak-uuu-281 NA coding upstream 11520 35360633 ~ 35360705 (+)
LOC110509092 LOC106597187 coding downstream 467625 35852550 ~ 35864073 (+)
LOC110508289 LOC106597230 coding downstream 588461 35973386 ~ 35975132 (+)
LOC110509094 LOC106597143 coding downstream 600590 35985515 ~ 35998946 (+)
riok1 riok1 coding downstream 643622 36028547 ~ 36039262 (+)
LOC110509101 LOC106597086 coding downstream 723701 36108626 ~ 36178080 (+)
G2132017 NA non-coding upstream 15531 35356424 ~ 35356694 (+)
G2132015 NA non-coding upstream 37061 35334906 ~ 35335164 (+)
G2132005 NA non-coding upstream 78469 35245289 ~ 35293756 (+)
G2132004 NA non-coding upstream 130530 35189856 ~ 35241695 (+)
G2132000 NA non-coding upstream 202574 35132427 ~ 35169651 (+)
G2132031 NA non-coding downstream 10603 35395528 ~ 35395734 (+)
G2132033 NA non-coding downstream 13302 35398227 ~ 35398458 (+)
G2132039 NA non-coding downstream 25744 35410669 ~ 35410875 (+)
G2132043 NA non-coding downstream 40286 35425211 ~ 35425422 (+)
G2132049 NA non-coding downstream 47584 35432509 ~ 35432826 (+)
G2131933 NA other upstream 279191 35091699 ~ 35093034 (+)
G2131426 NA other upstream 588807 34702206 ~ 34783418 (+)
G2131416 NA other upstream 684585 34687271 ~ 34687640 (+)
G2131383 NA other upstream 767272 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 998215 34352592 ~ 34409491 (+)
G2132291 NA other downstream 314921 35699846 ~ 35700235 (+)
G2132519 LOC100380659 other downstream 954169 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 980631 36365556 ~ 36369967 (+)
LOC110509112 LOC106597339 other downstream 1137829 36522754 ~ 36528580 (+)

Expression


Co-expression Network