LOC110509104


Basic Information

Item Value
gene id LOC110509104
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36243661 ~ 36245981 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590068.2
TTATTTGCTCCGCACTGGACCAAGATCCAATGAACTTGAGTGAAAGTCCTTGAACCAAAGTTAATGTTTGCTCTGCATGTACATTTATACCTATTAGCATTGTGTCTAACTGTCCAGTGTTGAGATGGAGATGAGTGGCCTCCTGAGTGTTCTGCTGGTCACATCAGCAGCCTTGCTGTTTATAGCTAACGGACAGAGCAACTATGATATGTTGACGGAGGTTGACAAGAAACATGTTGACATGGCTATAAGATATGCAAATAAGAATAGTGAGATTCAGAAATATAATCCAAAAGAGCACCTCAATTTTTTACAAGTTATTGGACAATCTGAGATCAATGCTCGGGAATTTAACATCAACTTGTTGTTGAAAGCAACAAACTGCCCTAAGGCCAGTAGTGATAGTGAACATCGCCCTGAATGTAGCTTTAAATCCAGAAGGCCTTATATAAACTGTGTTGTTTGCAGCAAAGACTTCCATGACAGCACTGACCCCTACATTGACTGTGTTCTCCACAAAGATGTGAAGAAGCAAGATGATGTCCGATATGACAAGTGTTCATCTCTTCTTCATGGAGGGCTTACAACTTTAGCCTTACATGCCGAAGAAGACCTTCAGACTGGATGCCTCGGCTGTTTCTGATAACTAATGAAAGAACGTGTCCAGAACGGATGGTCAGAGGCCGTCCTTTATAAAGCACTTCTGTCTTTGGATTTATAATGTAGCCTTTTGGGAGCTTCGGTTGGAATTGAACACAATGCAATTGTCTCAAAATTACTCTTCCCCAGTTTTGAATCTCTCGTAATACACAAATAAATATTGTAAAAACGTACCCTTCTTTTCTGATTCTCCACATATATTCAAAGAAATTGAGAGCAGTCTGCTACTTAAGATTCACATGGATTACCCCGCTGcttatttcaaaataatattaCTGTTGAAAGTAAAGCTTACTCTAACTTAACCAGTATGAGGGGTGAGAAATGAAATAAGGATGTTATTGGTTTCTTTTTTTCTGAATCTTAAAATTTGTTTTACAATTTTGGGAAGAAAATTGTCTGTATGTCTGCATATGTCTTGCAGTGTAAAATGATTGCAGCTCTGTTTCTACTTCTCTCAGGGCAGAGTGCCCACAGTCTtatctctgggcagccaggtctgCCTGTGACCGCAGATCACTACTAGATTTTTATAGGTAACATAATGAACTTAGGTCTGGTCCCTATGGCCAGGCTGTGTTCACGGAGTCTGCACATTGTCAATTCAGAATTTTCCTTAGTCACTGTGAACATATGTCTGTAGACCAAACAGCATTAAAGTTTGCTGTGGGTTTTGTCTTTCTAAAAggtgatattttttattttagattcGATGACGGTTTGGTTGGTTAACAACAACCGGAACTTGGCTTAGATTGTTGTCGGACTttaatcaaatattattttaaggggtggatcagctgTATTGCAGAAATAAATTCATtgcaaatcctacaatgtgattttctgga

Function

NR:

description
uncharacterized protein LOC110509104 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590068.2 True 1511 mRNA 0.39 4 36243661 36245981

Neighbor

gene id symbol gene type direction distance location
LOC118936612 NA coding downstream 3322 36235498 ~ 36240339 (-)
LOC118944824 NA coding downstream 11501 36230055 ~ 36232160 (-)
fastk LOC106597078 coding downstream 24987 36192769 ~ 36218674 (-)
LOC110509100 LOC106597103 coding downstream 179089 36053418 ~ 36064572 (-)
LOC110509099 LOC106597112 coding downstream 191485 36044041 ~ 36052176 (-)
LOC110508243 LOC100380659 coding upstream 93104 36339085 ~ 36391023 (-)
LOC118944889 LOC100380659 coding upstream 145293 36391274 ~ 36398759 (-)
faim2a LOC106597016 coding upstream 156588 36400409 ~ 36420016 (-)
abcf2a abcf2 coding upstream 178973 36424954 ~ 36437017 (-)
LOC110508244 LOC106597000 coding upstream 197242 36443223 ~ 36454287 (-)
G2132978 NA non-coding downstream 476 36234468 ~ 36243185 (-)
G2132969 NA non-coding downstream 46229 36196849 ~ 36197432 (-)
G2132992 NA non-coding downstream 85373 36157228 ~ 36158288 (-)
G2132934 NA non-coding downstream 165958 36077476 ~ 36077703 (-)
G2132923 NA non-coding downstream 201835 36041534 ~ 36041826 (-)
G2133005 NA non-coding upstream 4395 36250376 ~ 36255942 (-)
G2133006 NA non-coding upstream 11756 36257737 ~ 36258004 (-)
G2133009 NA non-coding upstream 21263 36267244 ~ 36267598 (-)
G2133027 NA non-coding upstream 66788 36312769 ~ 36313075 (-)
G2133048 NA non-coding upstream 92327 36338308 ~ 36338554 (-)
G2132971 NA other downstream 18282 36224213 ~ 36225379 (-)
LOC118944844 riok1 other downstream 218460 36023714 ~ 36025735 (-)
lyrm4 lyrm4 other downstream 225829 36005489 ~ 36017873 (-)
G2131641 NA other downstream 1725532 34516522 ~ 34518129 (-)
G2131621 NA other downstream 1757485 34485869 ~ 34486176 (-)
G2133007 NA other upstream 17021 36263002 ~ 36263330 (-)
LOC110509111 LOC106597319 other upstream 310519 36526794 ~ 36557532 (-)
LOC110509127 LOC106596915 other upstream 1520737 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1882148 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 2273590 38519571 ~ 38526920 (-)

Expression


Co-expression Network