dsela (LOC106597370)


Basic Information

Item Value
gene id dsela
gene name LOC106597370
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36596099 ~ 36602659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966847.1
GATGATGAAATGTAGAATTGTTGGCTCAGTTGAAGTGATCTTATCTGTGTGAATAATTAAGAGCAGAGCTCAGCACAGTGCAGAAGGGTTGTCTCACGTTGTCTCACATTCTTTTCTTTTTTAACTTTCTCTCGACCAAATTATGGCCGTAAATGTGGAGTCATATTGAAGGAATCTTTTCCAAGCAATACATGACTACATTGCACATCTGCTACCACAGCTGCTGCAGGTCCCATTTCAACCTTCTTACTTTGCAGACGCGTTTCATTGAAGCAAGAAGAACTAACGCTTGGATTTATCAATCTGTATGGAGATGGACTGCAATCACGGAAGTACTTTTCATTTCTTACGAAGGCTCTCTGGATAACGTACTGTTGTACTTTCTTGACGATGACAAGTCTGGAAGGACGGTAACAGAGCTGTGTTGATAGCTCAAGAGACACATGCAGTTATGTTCAAATGATTCTCCATCCAAGCAATGTCATGCACTGTTTCACATTCCTGTGGATTTAATAGAACACATGGGAAAGAGTGAAGGAATGGAATGTAACCCAAGATGAACTGCAACAGAGAAGTGACAGATAGCAGGGGAGTAGTAACTTGGAAAAGACAAACAGTGTTTCAGATTAGAAAAGAGCttaaaaaaggaaaataaaaataaacacatcTGGTTTTTGAATCATGGCTGAAAAATGCGCAGGACGGTCTGTGGTTTTATTCTCACTCTTGGCCGTTGTAGTTTCCTTCTCAGGAATTACTGATGttttaggggaaaataatattGATGAGGAGTTGGAGAAAATCACATTTCAAGGAGACGGAAGCACCAACGGGCATCCGGAAAACTGGCCGGCGAACCTTCACCCTAACCTGTATTTTCACCAGGTGGACATACGTTTACTGCAGCAGAGATCTGCCACGACGCACAGACATATTTTTAAAGTTATCCGGCTTGCTGTTGGGACTATGCTCGCCAATACTGCTCTCTATCTACCCCCGGTTAAGCATGAGGAATTTTCCAGCAAATGGAATGAAATTTATGGCAACaatctcccctctctcgctctgtactGTTTGCTCTGCCCCAAAGATACAGCTGCCCATCAATTCTTAATGAGATACATGGACCAGATGGCAGTGTACCCTAACTGGACGGTGACCAGCGCTCCCAACGACGAGGTTCCCATGGCTCACTCCCTCACAGGATTTGCCACAGCCTATGACTTCATCTACCCTCTCCTGGACACATCGCGAAGGGCACGCTACATGAAGAAAATACGTGTCGCCACAGAGGAGCTGTACGAACTCTCCAAACACAGGGGATGGGGGAAGCAGTTTTTACAGAATCATCAGACTACCAACATCTTAGCCATCCTGACCGGCGCCCTCGTGGTGGGAGCACACAGTGACCCGGAGACAATGATGTGGAAGCAGGTGGCCGTTAACTACATGGAAAAGACCATGTTCCTCCTCAGTCACGTAGTGGATGGCTCGCTAGACGAGGGTGTGGCCTATGGGAGCTACACCGCAAAGTCCATCACTCAGTACGTTTTCCTGGCGCGCCGCCACTTCGACATCGACAACACCCAGAACAACTGGTTGCGGGCGCACTTCTGGTTCTACCACTCCACACTTCTGCCAGGCTTCCAGAGGACAGTGGGCATCGCTGACTCCAACTACAACTGGTTCTATGGACCGGAGAGTCAGCTGGTGTTCCTCGATGCATTTGTGCTCCGGGACGGCACCGGAAACTGGCTGGCCCAGCAGATCTGGAAACATCGTCCCAAAGATGGCCCCATGGAGCAGTCAGCAGCCCAGCGCTGGGCCACCTTACACACTGAGTTCCTGTGGTATGATAGTGAGCTCTCCAAGCAACCACCAGCCGGGTTTGGCAAAGCAGTACTGCACATGTTCTCAAACTGGGGTGTGGTGACTTACGGGGCTGGTTTATCATATGGTCAAGGCAACACATTTGTCTCCTTCAAATCGGGGAAGCTGGGCGGTAGGGCGGTCTATGATATTGTCCATTCCAAGCCCTACTCCTGGCTGGAGGGCTGGAGCAATTTCAATCCGGGCCATGAGCACCCAGACCAGAACTCCTTTACCTTTGCCCCTAATGGACAGGTATTTGTTTCAGAGGCACTGTACGGCCCCAAATACAGCTACCTCAACAATGTCTTGACGTTTGCCCCGTCTCCCACAAGCCAGTGCAATCAGCCCTGGGAGGGCCAGCTTGGAGAGTGCGGCAAGTGGCTGCGGTGGGCGGAGCCTGAGGTCGGCAACACAGCCAGTGAGGTCATTGCAGCTGCATCCCATGGGGATTCTCTGTTCGTTAGTGGAGAAGCGGCATCGGCCTACTCCTCTGTGATGGGGCTGAAGAGCGTATACCGTGCCCTTGTCTTGCTCAACTCTCAGATTCTGCTGGTGTTTGACCATGTGGAAAAAAGCAAGGAGTCTCCGTTGAGTACTCTGAGTGCTTTCTTTCACAACTTGGACATTGATTTTAAATACGTCCCTCACAGGGCTTTAGACAGGTACAATGGGGCACTGATGGACGTTTGGGATGCTCACTACCAAATGTTTTGGTTTGACAGTCAGGGGAATAGTCCAGTGGCGAGAATACAGGAGGCAGAGCAGGCTGCTGAGTTTAAGAAACGATGGACCCAGTTTGTCAACGTGACCTTTCCAATGGAGGGCACGGTCACCAGAGTGGCCTATTTGATGCACAGTCCCAATGTCAAAATCTCCAACTGCAGATTCATCGACAATAGTAAAAATGGAGTACGACTCTCTATTGTCGTCAACGGCACAGAATCCATTGTGTCCATCGTAACAAACTACAATGACATTGGCGCCAGATATAGCTACTTGGGCTTTGGGGGATATGCAAAGATGCAAAGCAGGCATCAGATAATCCACTTCGGTCTGGGAGTTCAAACGATGACTGAACAAAACACTGTGGATCCAGTCTATGACTTTGGGTTTATGGTTAATATAGTGGGAGGGCTGACACTGTGTCTCGCCATTGGGTTTTTAATCCTGCAACGCACGTTTTATTTCTGCTTCCGCAAGATCATGCGCTATACTTTAACGTTTGTTCTCCTGCTGTGGGTTGTTGAGTTTCTGTTTGTCTCCAATAGCTGTGATTGGCTTGTCTGTGTCCAATCAGTGTCCGATCTGCCCCCAAACCCTCTCCCCACAGTCGTCGTTACATCCCTGCCAGGGTCTGGGGCTGAAGTTCTCAAGCCCCTTTTCTATAACAGCTCTGATTTTGTTTATCTCCAAGTCCCCACAGAGCACCTAGTCATCCCGGACACTGAGTTCAACTTTGACCCCCTGGTGGATGCCTGCGTGTGGTCCAGACTAGATGCGGAAAGAGGTCACTACAAGGCCATCCAGGGCTGGTTCCATTCCTTGGTCTATAACCCTAGACTTCACCTGCAGAACATTCAGTTGCACAACGAGGGCAGCAGGAATGAGATTGAGGTGGAGCTTTCTGGCAAGAGGAGGAAGCCAATTCGTAGGCAGTCAGGGTCAAGGGGGAGTTCAGATAGAGATGGGGAGTATGTTCGGGAGCTAAGGCGGCACATGGAGAAGTACCCTAATGCCCGCCCTGTCCTCAGCCTGAGCAGCGGGAGCTGGACCCTGAAACTCCCGTTTTTCCGAGAGGTGGTCGGTCACTCATTTCGGGCGTTGCACGTGGTGCGAGATCCTCGCGCTTGGATTTACCTTATGCTCTACAACAGCGAGCCAAGCCTCTATTCTCGCAAGAATGTGCAAAAACACGTCGCTGCAATTTTTAAGCAAGAGAGGAACGGCGGGAGAAGCAAGTGTACACTAGGGTTCACCCAGGAATTCTTGACATTGCACAGCGTCCTCTCTGATCCAGAGATGGAGCCGGTGCTGCTACTGGCCCATCTGTGGCTGGCCCACACAACCACGGCACTCCAGGTCAACGGCGACCTCACCGCCTCTTACCTCCATGTGAAATTTGAGGACATTGTGCAATATCCTGAGGAGACAGCTGGAAAGATACACACGTTTCTCGGGGTTCCCGTGGCCCCAGCTGCCCTCAACCAGCTCATGTTCGCCACCTCCACCAACCTGTACAACCTGGTGTATGAGGGAGACATATCGCCAGTCAGCATCAATGTGTGGAGAGAAAAAATGCCCATCCACGAGATCAGAATGATAGAGGACACATGCTTAAAGGTTATGGAGAGGCTTGGGTACTCAAGGTACTTAAGTTAATAGCTGCTGTATGATGTCCTACGATGGACACCGTACTTTTGGTTTGTTGACATGTATACTTTGTTGTTCTGTATTTTGCACATTCCACCATTATGATACTTTTAATTGTCCAGTCCTTGTTTATAGACTGGGATGTATAAAATAGAACAGAGTGCTCATTAACACTTTTTTAAAGTGTATGATTTGTCTGACTAACGTGATGTGTTTTCATCCAAACAGTTTTGAAGTTTGTTGGCTGGTTATTTAGCCACGCCCAGAATCTCCTGGCGAGCATTTTTGGAGCATGTAGCAATGCTAGGGGCACACGGATTGTTGattcaacatttaaaaaatcagcaaccacagctagtgAAATCTCTGCAACcctaaacaaagagttgcagtttgTTTTTAGAATGGGTGGCTAGTACTAAACTGaccctgaacatctctaaaactaaaagcattgtatttggtacaaatcatttagagatgctctgcttttttgacaccgcactccacaaagcaagtcccgcaggctctagttttatatTGTCTTGATTTTTTTGGTCCAGTTATATGGTTAAGTGCTGCAAATAAGgacctaaaaaaaaaactgcagctggcccagaacagagcgacacatcttgctcttcactgtaatcagagggctaatatcaatATTTTGCAGGCCAGTCTTGGCTAAaaatagaggagagacagactgcATCGCTTCTTTTTGacatttttataagaaacatttatGTGCTGAAAATTCCACATTGTTTgaatagtcaacttacacacggcactgacacacacacttaccccaccagacatgacgccaggggtcttttcacagtccccaaatccagaacgaATGAAAGGAAACATACATTATTATatagaactcccttccatctcaaatagctcaagtgaacagcaaacctggcttgaatcccccccccctcctcctcttcccccccagataaagcaacacctcacagaaCGCCTCTCCCTTATTGGACCTAATTATGTTGCGTGTATGGACTGATAGATGCCTACTGACTGTACATTTAAATGATCAACATTGAAACGATAAATGTAGGCCTAGAATAGTAGGTCTCTCTTGATATTTTTTTTCAGTATTGAGTCAGTGCAGAATATTTTAGTTATATTTTTTACTtgtaaatgtatgtagttctgtctttTTAGCTGTTCTTATCTATTAATGTTCTCTATCATGTTTTGTGTGGGACCCCAGAaaaagtagctgctgctatcACAACAACTAATGGAGATACCAAATACCAAGAAAAACACGAACAATTGTAATAGTGGTGCATTCAGTCGATAATAAgtttaaacatatatattttttgggggtgaaATATCCCTTTAAAGTAATTGGAATACTGGATTGGATTTAACAGTGTTATTTACATATTTTGCTACAGTATGTCATAAATATTTTCTAAACTATTGTCGATCACTTGATTTCAAACCCCACTCTTATTGATAGTAGATTTTTTTTCAGTGGTAAGGGGTAAAACCCTGCTTGTAAATTCAGTGCAGTACTTTTGTCAGTGCATTGTGGGATACAACAACCCAGCAGGCTTCTCTTACTGATCCGTAAATGCATTTTGCGgaagaaaaacattttttcaaCCAGGAAGTGAATACAGTTATAGCAAACTCTTTGAAACATGCAAAATATGCAATCGTTTAAATTGAGAAATGATTTACATTCACTGCAAAGAAAGAGCCTTGCCTCATATTGCTTTAGAAAAGAcagcatatatattttttttactgttgtgTAAGTCACGTCCGAAACACTGCACTAAGCATAGGACATGAAATATCCTTTTCCCGAAGATGGTCTTCATCAGATATTTTAAAAGTCACTTTATTCCAAAAAcaatttatttgtgtgtgtgcttcatgCTATGATGTCACAACAATTCAAAAGAGGATTATCACAAACTAACAAGACTTTAAAAAATAATCTAATACAGCTCTTCAGAAATGGGATACCTTTGTAGAATGCGTTGGATTGTGTTTGTACGGTGCTTTAGACATCTTTCTGAAAGCTGTAGATGCACTGTAGGCTTATAGCTTGAGTGCAGCTTAATGTGGAATTACATGCGTAATGCATCTACGGTATCCTCACCTGCTGCTTTCTTCCCTta

Function

NR:

description
dermatan-sulfate epimerase-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966847.1 True 6422 mRNA 0.45 2 36596099 36602659

Neighbor

gene id symbol gene type direction distance location
LOC110509114 LOC106597346 coding upstream 19780 36569666 ~ 36576319 (+)
LOC110509112 LOC106597339 coding upstream 67519 36522754 ~ 36528580 (+)
LOC110509110 LOC106597311 coding upstream 100250 36491489 ~ 36495849 (+)
zgc:136930 LOC106597301 coding upstream 114516 36474132 ~ 36481583 (+)
afg3l2 afg3l2 coding upstream 258620 36313732 ~ 36337479 (+)
trnas-uga-108 NA coding downstream 38381 36641040 ~ 36641121 (+)
trnas-cga-34 NA coding downstream 39280 36641939 ~ 36642020 (+)
trnas-uga-109 NA coding downstream 40072 36642731 ~ 36642812 (+)
trnas-cga-35 NA coding downstream 40971 36643630 ~ 36643711 (+)
trnas-uga-110 NA coding downstream 42006 36644665 ~ 36644746 (+)
G2132700 NA non-coding upstream 27739 36567326 ~ 36568360 (+)
G2132684 NA non-coding upstream 54686 36540406 ~ 36541413 (+)
G2132675 NA non-coding upstream 84654 36506589 ~ 36511445 (+)
G2132520 NA non-coding upstream 111942 36483263 ~ 36484157 (+)
G2132636 NA non-coding upstream 155903 36439996 ~ 36440196 (+)
G2133132 NA non-coding downstream 4266 36606925 ~ 36607179 (+)
G2133149 NA non-coding downstream 26921 36629580 ~ 36629869 (+)
G2133191 NA non-coding downstream 84296 36686955 ~ 36687528 (+)
G2133199 NA non-coding downstream 91658 36694317 ~ 36695004 (+)
G2133229 NA non-coding downstream 119657 36722316 ~ 36722590 (+)
G2132611 LOC100380659 other upstream 226132 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 231105 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 620967 35973386 ~ 35975132 (+)
G2132291 NA other upstream 895864 35699846 ~ 35700235 (+)
G2133551 NA other downstream 435994 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1366444 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1520737 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1923016 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2186883 38789495 ~ 39333323 (+)

Expression


Co-expression Network