trnas-cga-47


Basic Information

Item Value
gene id trnas-cga-47
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36683380 ~ 36683461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnas-cga-47
GCTGTGATGGCCgagaggttaaggcgttggatttgaaatccaatggggtctccccgcgcaggttcgaaccctgctcacagcg

Function

NR:

description
hypothetical protein EH28_21818

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-cga-47 True 82 mRNA 0.59 1 36683380 36683461

Neighbor

gene id symbol gene type direction distance location
trnas-uga-129 NA coding upstream 1507 36681792 ~ 36681873 (+)
trnas-uga-128 NA coding upstream 2670 36680629 ~ 36680710 (+)
trnas-cga-46 NA coding upstream 3677 36679622 ~ 36679703 (+)
trnas-uga-127 NA coding upstream 5259 36678040 ~ 36678121 (+)
trnas-uga-126 NA coding upstream 6847 36676452 ~ 36676533 (+)
trnas-cga-48 NA coding downstream 1507 36684968 ~ 36685049 (+)
trnas-cga-49 NA coding downstream 3101 36686562 ~ 36686643 (+)
trnas-uga-130 NA coding downstream 4119 36687580 ~ 36687661 (+)
trnas-cga-50 NA coding downstream 4278 36687739 ~ 36687820 (+)
LOC118944833 NA coding downstream 293713 36977174 ~ 36982260 (+)
G2133149 NA non-coding upstream 53511 36629580 ~ 36629869 (+)
G2133132 NA non-coding upstream 76201 36606925 ~ 36607179 (+)
G2132700 NA non-coding upstream 115020 36567326 ~ 36568360 (+)
G2132684 NA non-coding upstream 141967 36540406 ~ 36541413 (+)
G2132675 NA non-coding upstream 171935 36506589 ~ 36511445 (+)
G2133191 NA non-coding downstream 3494 36686955 ~ 36687528 (+)
G2133199 NA non-coding downstream 10856 36694317 ~ 36695004 (+)
G2133229 NA non-coding downstream 38855 36722316 ~ 36722590 (+)
G2133231 NA non-coding downstream 43656 36727117 ~ 36727418 (+)
G2133247 NA non-coding downstream 76398 36759859 ~ 36760060 (+)
LOC110509112 LOC106597339 other upstream 157965 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 313413 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 318386 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 708248 35973386 ~ 35975132 (+)
G2132291 NA other upstream 983145 35699846 ~ 35700235 (+)
G2133551 NA other downstream 355192 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1285642 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1439935 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1842214 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2106081 38789495 ~ 39333323 (+)

Expression


Co-expression Network