LOC118944833


Basic Information

Item Value
gene id LOC118944833
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36977174 ~ 36982260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966341.1
catagccccacgcatagcccaacgcatagcccaacgcatagccctacacatagccccacCCCAACGCATAGCACCACACATAGCCCAACGCATAGCCCAACGCATAGCCCAACGCATAGCCCCACGAATAGCCCTACAtatagccctacacatagcccaacgcatagccctacacatagccctacacatagcccaACGCATAGCCCAACGCATAGCCCCACGAATAGCCCTACAtatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagcccaacgcatagccctacacatagcccaACGCATAGCCCCACGaatagccctacacatagccccacgaatagccctacacatagccctacacatagccctacacatagcccaacgcatagccctacacatagcccaACGCATAGCCCCACGaatagccctacacatagccccacgaatagccctacacatagccccacgaatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagccctacacatagccctacacatagcgctacacatagccctacacatagccctacacatagcccaacgcatagccctacacatagcccaACGCATAGCCCCACGaatagccctacacatagccccacgaatagccctacacatagccccacgaatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagcccaacgcatagccccacgcatagccctacacatagcccaACGCATAGCACCACACATAGCCCAACGCATAGCCCAATGCATAGCCCAACGCATAGCCCCACGCATAGCCCAACGCATAGCACCACACATAGCCCAACGCATAGCCCAACGCATAGCCCAACGCATAGCCCCACGAATAGCCCTACAtatagccctacacatagcccaacgcatagccctacacatagccctacacatagcccaACGCATAGCCCAACGCATAGCCCCACGAATAGCCCTACAtatagccctacacatagcccaacgcatagccccacgcatagccctacacatagccccacgaatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagcccaacgcatagccctacacatagcccaACGCATAGCCCCACGaatagccctacacatagccccacgaatagccctacacatagccctacacatagccctacacatagcccaacgcatagccctacacatagcccaACGCATAGCCCCACGaatagccctacacatagccccacgaatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagcccaacgcatagccctacacatagcccaACGCATAGCCCCACGaatagccctacacatagccccacgaatagccctacacatagccccacgaatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagcccaacgcatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagccctacacatagcccaacgcatagccccacgcatagccctacacatagccctacacatagccctACACATTTTTATCCAAATATTTGCCTACATGTTGTCTGTTTCAAAGACCATTTGCCATCCTGCTTCAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966341.1 True 2019 mRNA 0.53 3 36977174 36982260

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 289354 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 289513 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 290531 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 292125 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 293713 36683380 ~ 36683461 (+)
c28h7orf25 cssa03h7orf25 coding downstream 455772 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 465479 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 643238 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 692558 37674818 ~ 37694631 (+)
LOC110509128 LOC100136478 coding downstream 1229016 38211276 ~ 38229238 (+)
G2133487 NA non-coding upstream 6527 36970077 ~ 36970647 (+)
G2133334 NA non-coding upstream 15381 36926859 ~ 36961793 (+)
G2133329 NA non-coding upstream 60474 36911853 ~ 36916700 (+)
G2133328 NA non-coding upstream 69237 36907670 ~ 36907937 (+)
G2133326 NA non-coding upstream 71902 36904981 ~ 36905272 (+)
G2133494 NA non-coding downstream 8322 36990582 ~ 36991355 (+)
G2133507 NA non-coding downstream 37461 37019721 ~ 37020480 (+)
G2133559 NA non-coding downstream 61683 37043943 ~ 37044354 (+)
G2133674 NA non-coding downstream 164491 37146751 ~ 37148519 (+)
G2133780 NA non-coding downstream 274522 37256782 ~ 37257207 (+)
LOC110509112 LOC106597339 other upstream 451759 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 607207 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 612180 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 1002042 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1276939 35699846 ~ 35700235 (+)
G2133551 NA other downstream 56393 37038653 ~ 37038924 (+)
G2134356 NA other downstream 986843 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1141136 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1543415 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 1807282 38789495 ~ 39333323 (+)

Expression

LOC118944833 Expression in all Baseline Samples

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LOC118944833 Expression in each Bioproject

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LOC118944833 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 3.
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Co-expression Network