LOC110509126 (LOC106596905)


Basic Information

Item Value
gene id LOC110509126
gene name LOC106596905
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37625498 ~ 37650985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967110.1
TTAACTTCTGCTTGGTTGTCCCTTCCAACCAGATATAAGGAGTCTGAGGCCCCTGTATCCATGAGTCAGATATCTTCTTCCTCTGTGGATCCTCCAAGACATACAAATTAAACTGTAGGAGGGGAAAAAGTGATCCGGCACCATGAGTACGGACGCGGAGATGCAAATCTACGGCAAGGCTGCCTTGTACCTTCGTAAACccgagagggagaggatggaggcacAAGCCGCACCCTTTGATTCAAAGAACGCCTGCTATGTGACAGACGTCAAGGAGCTGTACCTTAAGGGCTTGATCACTGGCAGGACAGAGGGAAAGTGTACTGTCAAAGTCACAAATGCTGATGGCACTACAGTGgacaaagagttcaaagAAGCAGACATCTACCAGATGAACCCCCCGAAGTACGACAAGATTGAGGACATGGCCATGATGACCTACCTGAATGAAGCCTCTGTGTTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTATACCTACTCTGGGCTCTTCTGTGCCACGGTGAACCCCTACAAGTGGCTCCCCGTGTACGACGAAGTGGTTGTCAACGCCtacagagggaagaagaggatggaggctccaccccatatcttctctgtctctgacaaCGCCTTCCAGTTCATGATGATTGataaggAGAATCAGTCCGTCCTGATTACTGGAGAATCCGGTGCAGGAAAGACTGTCAACACCAAGCGTGTCATCCAGTACTTTGCCACCATTGCAGTTTCTGGTGTCAAGAAGGAAGCAGACCCCAGCAAAATGAAGGGGTCTCTTGAGGATCAGATCATTGCAGCTAACCCTCTGCTGGAGTCTTACGGTAATGCCAAGACAGTGAGGAACGACAACTCGTCTCGCTTTGGTAAATTCATCAGGATTCACTTCCAAGGAGGAAAACTGGCTAAAGCTGACATTGAGACCTacctgctAGAGAAGTCCAGAGTGGCCTTCCAGCTGCCCGCTGAGAGAGGCTACCATATCTTCTACCAGATGATGACCAACCACAAACCTGAGCTAGTTGAAATGACACTCATCACCACCAACCCTTACGACTTCCCCATGATCAGCCAGGGTCAGATCAGTGTGGCCAGCATTGACGACAAGGTCGAGCTGGATGCCACCGATGATGCCATTACAATCCTGGGCTTCTCTAACGATGAGAAAATGGCCATCTACAAGCTGACAGGAGCTGTAATGCACCATGGCAACTTGAAATTCAAGCAGAAGCAGCGTGAGGAGCAGGCCGAGTCAGATGGAACCGAGGTGGCTGATAAAATCGGCTACCTGCTGGGCCTGAACTCAGCTGAGTTGCTGAAATGTCTGTGCTACCCCAGAGTGAAGGTCGGCAACGAGTACGTGACCAAGGGACAGACTGTGCCTCAGGTTTATAATGCAGTCATGGCTCTGGCCAAGTCCATCTATGAGAGGATGTTCTTGTGGATGGTCATCCGTATCAACGAGATGTTGGACACCAAGAATCCCAGACAGTTCTATATCGGTGTGCTCgatattgctggatttgagatcTTTGATTACAACAGCATGGAGCAGCTGTGCATCAACTTCACCAATGAGAAACTGCAacagtttttcaaccacaccatgtTCGTCCTGGAACAAGAGGAGTACAAGAAGGAGGGAATCGTCTGGGCCTTCATTGACTTCGGCATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCATTGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAAGCTTCAGACACTACCTTCAAGAACAAGCTGAACGACCAACATCTTGGCAAAACCAAGGCATATGAGAAACCCAAGCCTGCCAAAGGAAAGGCAGAAGCCCACTTCTCCCTGGTGCACTACGCCGGCACTGTGGACTACAACATCACTGGCTGGCTGGAGAAGAACAAGGACCCCCTGAACGACTCAGTTATTCAGATGTACGGGAAGTCCTCAGTCAAACTGTTGGCTGCCCTGTATCCCGCTGCCCCACCTGAGGATACGACCAAGAAAGGAGGCAAGAAGAAGGGTggctccatgcagactgtgtCGTCCCAGTTCAGGGAGAACTTACAAAAGCTGATGACCAACTTGAGGAGCACTCATCCTCACTTTGTGCGCTGCCTGATCCCCAACGAGTCAAAGACTCCAGGTCTGATGGAGAACTTCCTGGTTATCCACCAGCTCAGGTGTAATGGTGTTCTGGAAGGTATCAGGATCTGCAGAAAGGGCTTCCCCAGCAGAATCATCTATGCTGACTTCAAGCAGAGGTACAAAGTACTGAATGCCAGTGTCATCCCTGAGGGCCAGTTCATGGACAACAAGAAGGCTTCTGAGAAGCTGCTTGGGTCCATTGATATAAATCACGACGattacaagtttggacacaccaagGTGTTCTTCAAAGCCGGTCTGCTGGGTGTcttggaggagatgagagacgaGAAGCTGGCTGTTCTGGTCGGCATGGTCCAGGCTCTCAGCCGTGGATTCCTCATGAGAAAAGAGTTCACcaagatgatggagaggagAGATGCCATCTTCACCGTCCAGTACAACATCCGTTCATTCATGAATGTGAAAACCTGGCCATGGATGAAGGTGTACTTCAAGATCAAGCCCCTGCTGAAGAGCGCTGAGACGGAGAAGGAGCTGGCCAACATGAAGGAGAACTTTGACAAGATGAAAACAGACCTGGCCAAGGCTCTGGCCAAGAAGAAGGAGTTGGAGGAGAAGATGGTGTCCATGCTACAAGAGAAGAACGACCTGGCACTCCAAGTTGCATCTGAATCAGAGAATCTGAACGATGCTGAGGAAAGGTGTGAGGGACTCATCAAGAGCAAGATCCAGCTGGAGGCCAAACTCAAAGAAACGACAGAGaggctggaggatgaggaggagatgaaTGCTGAGTTGACTGCCAAGAAGAGGAAGCTGGAGGATGagtgctctgagctgaagaaggaCATTGATGACCTGGAGCTCACCCTGGCCAAAGTGGAGAAGGAGAAGCACGCCACTGAAAACAAGGTTAAAAACCTGACAGAGGAGATGGCGTCTATGGATGAGAGTGTTGTCAAGCTGACCAAGGAGAAGAAAGCCCTCCAAGAGGCCCACCAGCAGACACTGGACgacctgcaggcagaggaggacaAAGTCAACACTCTGACCAAGTCCAAGACCAAGCTGGAACAGCAAGTGGACGACCTTGAGGGTTCTCTGGAGCAAGAGAAGAAGGTCCGTATGGACCTTGAGAGAGCCAAGAGAAAGCTGGAGGGAGATCTGAAACTGGCCCAGGAGTCCATAATGGACCTGGAGAATGACAAGCAGCAGTCTGATGAGAAAATCAAGAAGAAGGAGTTTGAGACATCCCAGCTCCTCAGTAAAATAGAGGATGAACAGTCTCTGGGAGCTCAGCTACAGAAGAAGATCAAGGAACtccagGCCCGTattgaggagctggaggaggaaatTGAAGCTGAGCGTGCTGCCAGGGCTAAGGTTGAGAAGCAGAGAGCCGATCTCTCCAGGGAACTTGAGGAGATCAGCGAGAGGCTGGAGGAGGCTGGAGGCGCCACTGCTGCTCAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGCTGCGTCGTGATCTTGAAGAGTCCACCCTGCAGCATGAGTCCACAGCCGCCGCACTGCGCAAGAAACAGGCCGACAGTGTGGCTGAGCTCGGGGAGCAGATTGACAACCTGCAGCGCGTCAAGCagaagctggagaaggagaagagtgAGTACAAGATGGAGATTGATGACCTCTCCAGCAACATGGAGGCCATCGCCAAGGCTAAGGGCAATCTGGAGAAGATGTGCCGTACTCTTGAGGACCAGCTGAGCGAGATCAAGACTAAGAATGATGAGAATGTTCGCCAGATCAACGACATCAGTGGACAGAGGGCCAGACTCCTGACAGAAAATGGTGAGTTTGGCCGCCAGCTGGAGGAGAGGGAATCTCTGGTGTCTCAGCTGACCAGAGGCAAACAGGCCTTCACCCagcaggtggaggagctgaagaggCAGATTGAAGAGGAGGTCAAGGCTAAAAACGCACTGGCCCATGGTGTCCAGTCTGCCCGCCATGACTGTGACCTCCTGAGGGAGCAGTTTGAGGAAGAGCAGGAGGCCAAGGCAGAGCTGCAACGCGGCATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGGACTAAGTATGAAACTGATGCCATCCAGCGCACAGAAGAGCTGGAGGAGTCCAAGAAGAAGCTGGCCCAGCGTCTGCAGGAGGCTGAGGAGACCATTGAGGCGACCAACTCCAAGTGTGCCTCCCTGGAGAAGACCAAGCAGAGGctgcagggagaggtggaggacctCATGATTGACGTTGAAAGAGCAAACGCCATGGCCGCCAACCTAGACAAGAAGCAGAGGAACTTTGACAAGGTTCTGGCAGAGTGGAAGCAGAAGCATGAGGAGGGCCAGGCTGAGCTGGAAGGAGCTCAGAAGGAGGTTCGCTCAATGAGCACTGAACTCTTCAAGATGAAGAACTCCTACGAGGAGGCTCTGGATCATCTGGAGActctgaagagagagaacaagaacctGCAACAGGAGATCGGTGACCTAACTGAGCAGATCGGAGAGACTGGCAAGAGCATCCATGAGCTGGAGAAGGCCAAGAAGACCGTGGAGACAGAGAAGTCTGAGATCCAGACTGCTCTGGAGGAGGCTGAGGGAACACTGGAGCACGAGGAATCCAAGATTCTGCGTGTGCAGCTGGAGCTGAACCAGATCAAGGGTGAGGTGGACAGGAAGCTGGCTGAGAAGGACGAGGAGATGGAGCAGATCAAGAGGAACAGCCAGAGGATGGTTGACTCCATGCAGAGCACCCTGGATTCTGAGGTCAGGAGCAGGAATGATGCCCTGAGggtgaagaagaagatggagggagacttGAACGAGATGGAGGTTCAGCTGAGCCACTCCAACAGGCAGGCCGCTGAGGCCCAGAAACAGCTGAGGAACGTCCAGGGACAGCTCAAGGATGCCCAACTGCACCTTGATGACGCCGTCCGCGCCGCAGAGGACATGAAGGAGCAGGCAGCCATGGTGGAGCGTAGGAACGGTCTGATGGTGGCTGAAATCGAGGAGCTGAGAGTTGCtctggagcagacagagagaggacgcaAAGTTGCTGAGACTGAACTGGTAGACGCCAGCGAGCGTGTTGGACTGCTGCACTCCCAGAACATCAGCCTTCTGAACTCCAAGAAGAAGCTGGAGTCTGATCTGGTGCAGGtgcagggagaggtggaagaCATTGTCCAGGAGGCCAGGAATGCAGAGGAGAAGGCCAAGAAGGCCATCACTGACGCGGCCATGATGGCtgaggagctgaagaaggagcaggACACCAGTTCTCACCtggagaggatgaagaagaacctGGAGGTCACAGTCAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGAATCTGGCCATGAAGGGAGGCAAGAAGCAGCTCCAGAAACTGGAGTCCAGGGTTCGTGAGCTCGAGACTGATGTGGAGGCTGAGCAGAGAAGAAGTGTAGATGCGGTCAAGGGAGTCCGCAAGTATGAGCGCAAAGTCAAGGAGCTCACCTACCAGACTGAGGAGGATAAGAAGAATGTTGTCAGACTTCAGGACCTGGTAGATAAGCTGCAGATGAAAGTCAAGGCCTACAAGAGGCAGGCTGAGGAAGCGGAGGAACAAGCCAACGGCCACATGTCTAAGTTCAGGAAGGTTCAGCATGAGCTGGAGGAGGCTGAGGAGCGTGCTGACATCGCTGAGTCTCAAGTCAACAAGCTCAGAGCCAAGACCCGCGACACTGGAAAGGGCAAAGAAGTTGCTGAATAAACAAGACCAAAGTCTTACATCATTTTCCTGTGTTGCATAAAATATGATTTTCACGGTGAAATGTTTAACTTGGATTAAAAACGTGTCGGCTTACATACA

Function

NR:

description
myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967110.1 True 6052 mRNA 0.52 41 37625498 37650985

Neighbor

gene id symbol gene type direction distance location
LOC110509119 rala coding upstream 154697 37447739 ~ 37470801 (+)
c28h7orf25 cssa03h7orf25 coding upstream 182600 37438032 ~ 37442898 (+)
LOC118944833 NA coding upstream 643238 36977174 ~ 36982260 (+)
trnas-cga-50 NA coding upstream 937678 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 937837 36687580 ~ 36687661 (+)
LOC110509125 LOC106596905 coding downstream 23833 37674818 ~ 37694631 (+)
LOC110509128 LOC100136478 coding downstream 560291 38211276 ~ 38229238 (+)
LOC110508247 LOC106596897 coding downstream 641401 38292386 ~ 38526926 (+)
LOC110509131 LOC106596891 coding downstream 883572 38534557 ~ 38549486 (+)
LOC118944835 NA coding downstream 1098031 38749016 ~ 38756005 (+)
G2134086 NA non-coding upstream 25969 37596641 ~ 37599529 (+)
G2134075 LOC106569812 non-coding upstream 36404 37588343 ~ 37589094 (+)
G2134073 NA non-coding upstream 40803 37579169 ~ 37584695 (+)
G2134066 NA non-coding upstream 52221 37572862 ~ 37573277 (+)
G2134065 NA non-coding upstream 54052 37571184 ~ 37571446 (+)
G2134223 NA non-coding downstream 61645 37712630 ~ 37713038 (+)
G2134230 NA non-coding downstream 69682 37720667 ~ 37720892 (+)
G2134242 NA non-coding downstream 89766 37740751 ~ 37740979 (+)
G2134243 NA non-coding downstream 91692 37742677 ~ 37742955 (+)
G2134259 NA non-coding downstream 108380 37759365 ~ 37759567 (+)
G2133551 NA other upstream 586574 37038653 ~ 37038924 (+)
LOC110509112 LOC106597339 other upstream 1100083 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 1255531 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 1260504 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 1650366 35973386 ~ 35975132 (+)
G2134356 NA other downstream 318118 37969103 ~ 37969465 (+)
G2134434 NA other downstream 472411 38123396 ~ 38143819 (+)
LOC118944840 LOC106596771 other downstream 1138557 38789495 ~ 39333323 (+)
G2135186 NA other downstream 1196495 38847480 ~ 38848317 (+)

Expression


Co-expression Network