LOC110509131 (LOC106596891)


Basic Information

Item Value
gene id LOC110509131
gene name LOC106596891
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 38534557 ~ 38549486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966728.1
gtctctctctctgtgtctgtctctctgtctgtctctctgtctgtctctctctctccggtgtAGGATATTTATCACAAATTCACAATTGTGTCTTTATTGATCACAATAATTAATCTTCATATCCGCTTTTCAGGTCCCTGTACATCGCTGATGTTTCACCACCCGTTCTGCTGCCACAAACTTTTTCACCTCGTACTCAGTCACGAGCGGCTGGTGTTGTCTCTCGCGCTGCCTGCGTAGCATGCGCGTTCGAAGCAGTGGTAAACGTGAAGACTAGTCTGCTGGCATTGATCtaccttccctctttctctggagtCGTCAAAGAGCCGGGCATAACCAGTCATCTTCCACGCTGACTGAGCGACGTGCTTGAAACAGAACCGAGACACAGGAGGCAAACCCCGTTCGTGGGCAAAAATGCGAGCGCTGTCCGTGGAGCTGAATCCGCTGCTGTTTCTACTGCTGTTCGGTTATTACCCTTCTGTGacagtcAAGCCTAAGGAAGGCTGGCAGGTGTACAGCTCGGCCCAGGATACAGAGGGGAGGTGTATCTGTACAGTGGTGGCTCCTGAACAGAACCTCTGCTCCAGAGACGCCAAGGAGGGACAACTCCGTCAGCTACTGGAGAAGGTCCAGAACATGTCCCAGTCAATCGAGGTGCTGAACCTGCGGACTCAGAGAGACTTCCAGTACATCATGAGGATGGAAGGCCAGTTCAAAGAGCTAAGGTCAAAGTTCAGACAGATAGAGACCAACAAGAAGACACAGGTCAACAGAAACTTCCAGGAGTTGAAGGGTAAGATGGAtgccctacagcctctgatcccTGTGTTGGAACAGTACAAGACAGATGCCCAGCTCATCTCCCAGTTTAAACAGGAGATCAGGAACCTCTCCATGGTGCTCACAGCCATCCAGGAGGAGATAGGAACCTATGACTACGAGGAACTACAACAGAGGGTCCTGAATCTGGAGAGCAGGCTACGCAACTGCATGAGCAAACTCAcatGCGGTAAACTGATGAAGATCACTGGACCTGTGACAGTGAAGACCTCTGGTACACGGTTTGGAGCTTGGATGACTGATCCACAGGCCTCCCCTAGAAACAACCGGGTCTGGTACATGGATAGCTACACCAACAACAAGATCGTCAAAGAGTACAAGTCCATAGCAGACTTTGTTTCCGGGGCCGAGTCTCTAACCTACAACCTGCCGTTCAAGTGGGCCGGGACCGACCACGTGGTGTACAACGGCTCTCTGTACTACAACAAGGTCCAGAGCAACATCGTGGTGTGTTACCGCTTCGAGACGGGCCGCGTGGTAACCCAGAGAGCTCTGGAGAACGCCGGCTTCCACAACGTCTACCCTTACACCTGGGGAGGCTACTCTGACATAGACCTCATGGCCGACGAGCTGGGTCTGTGGGCCGTCTACGCCACCAATCAGAACGCAGGAAACATCGTCATCAGCCAGCTCAACCCCGACACGCTGCAGGTCCTCGGAACCTGGAACACGGAATATTCCAAACGGAACGCGGGGGAGTCCTTTATGATCTGCGGAACACTCTACATCACTAACTCTCACCTGACTGGTGCTAAGGTCTACTACTCGTACTCCACCAAGACCTCCAGCTATGAGTACACAGACATCCCCTTCCATAACCAGTACTTCCACATGTCCATGTTGGACTACAACGCCAGGGACCGGGCGCTGTACGGCTGGAACAATGGACACCAGGTTCTGTTCAACGTCACGTTGTTCCACATCATCAACACAGAGGACGATTCCTGAGGAGGAAGAACCTCTGGAACACTGATTAACATTCCTGGTGTTCCGGTGTTCCGTCAGTCATTGTGGGAGTTCTGTTGTTGGTTCTCTAAATGGTATTTTTTGCTCTCTTCTTTTGACAATCCATCTTCGGATCTATTGGCTTCCCTTTCAAATTTCTAATGCAAGAATTACTAAAGATGTTGGCCTCCGAACTCTAAACTGTCTCCCAATGTCATGACAGAGTCATGATATTCTCTGGTAGTCCTACCTAGCAACCCCAATTTTCAATCATCTGGCCCTCTAACGATGACATCATGCACCGACAGTCTTCCTCATTTTCCTCTCTTTTGACACAAGCCTTTATTTTCACTTTATCCCTTTCCTTTCAGCTACTGGACTCTATGAGAGATTGTCTGGGCTTGGTAACATgcctctgattggctgggcttggGTAACATgcctctgattggctgggcttggGTAACATGCCTCTGATTGGCTGAGCTTGGGTAACATgcctctgattggctgggcttggGTAACATGCCTCTGATAGGCTGGGCTTAGGTAACATgcctctgattggctgggcttggGTAACATGCCTCTGATTGTCTGGGCTTGGTAACATgcctctgattggctgggcttggGTAACATgcctctgattggctgggcttggGGAACATgcctctgattggctgggcttggGTAACATgcctctgattggctgggcttggGTAACATccctctgattggctgggcttggGTAACATgcctctgattggctgggctggGTAACATGCCTCTGATTGGGTGGGCTTCGGTAACATGcatctgattggctgggcttggGTAATATGCCTCTGATTGGGTGGGCTTCGGTAACATGcgtctgattggctgggcttggGTAACATGCCTCTGATTGGGTGGGCTTGGGTAACATGCCTCTGATTGGGTGGGCTTGAGTAACATGCCTCTGATTGGGTGGGCTTGGGTAACATGCCTCTGATTGGGTAACTTAGCTTTTGTATCCATTGCAACAGTATCAATATGAGTATGCCTTATTCAGTGCAGTCTGTTCTGTAAGTCCATAGGATAACAGGTGTTCTGTCCTGCATGAATGTCTATGATAGCATGTCTAGCTCTCCgtggcttgcatcccaaatggcaccctaggtcccaaagggctctggtcaaaagtagcacactatatagggagtaggattTCATTTTGGATGCAACCTATGGCTGTCCTGATAGCATCGAAACTCTGTCTGTGGACTCTCTCGGCAaccatctctctttcccactgTAACACAATTAATGACTATTGTCTGATTATactgtatatggatgagcagGAAAATACACATTTATATACACAATTAGTGCTACATTATGGAAATAAAATGATTATTGTTTTTGATGAAGTA

Function

NR:

description
PREDICTED: noelin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966728.1 True 3209 mRNA 0.50 6 38534557 38549486

Neighbor

gene id symbol gene type direction distance location
LOC110508247 LOC106596897 coding upstream 7637 38292386 ~ 38526926 (+)
LOC110509128 LOC100136478 coding upstream 305319 38211276 ~ 38229238 (+)
LOC110509125 LOC106596905 coding upstream 839926 37674818 ~ 37694631 (+)
LOC110509126 LOC106596905 coding upstream 883572 37625498 ~ 37650985 (+)
LOC110509119 rala coding upstream 1063756 37447739 ~ 37470801 (+)
LOC118944835 NA coding downstream 199530 38749016 ~ 38756005 (+)
LOC118944840 LOC106596771 coding downstream 240009 38789495 ~ 39333323 (+)
LOC118944873 LOC106596709 coding downstream 811895 39361381 ~ 39381788 (+)
epb41l3b LOC106596732 coding downstream 834993 39384479 ~ 39484807 (+)
LOC110508249 LOC106596749 coding downstream 943157 39492643 ~ 39494885 (+)
G2134719 NA non-coding upstream 26591 38501003 ~ 38507966 (+)
G2134718 NA non-coding upstream 27885 38503097 ~ 38506672 (+)
G2134771 NA non-coding upstream 98717 38435162 ~ 38435840 (+)
G2134770 NA non-coding upstream 99195 38434520 ~ 38435362 (+)
G2134747 NA non-coding upstream 172662 38361623 ~ 38361895 (+)
G2134820 NA non-coding downstream 14104 38563590 ~ 38564973 (+)
G2134828 NA non-coding downstream 23024 38572510 ~ 38572831 (+)
G2134846 NA non-coding downstream 65567 38615053 ~ 38615688 (+)
G2134865 NA non-coding downstream 115434 38664920 ~ 38667429 (+)
G2134869 NA non-coding downstream 131928 38681414 ~ 38685840 (+)
G2134434 NA other upstream 390738 38123396 ~ 38143819 (+)
G2134356 NA other upstream 565092 37969103 ~ 37969465 (+)
G2133551 NA other upstream 1495633 37038653 ~ 37038924 (+)
LOC110509112 LOC106597339 other upstream 2009142 36522754 ~ 36528580 (+)
G2135186 NA other downstream 297994 38847480 ~ 38848317 (+)
G2135433 NA other downstream 877361 39426847 ~ 39428093 (+)
G2135679 NA other downstream 1563098 40112584 ~ 40115950 (+)
G2136555 NA other downstream 2133824 40683310 ~ 40684329 (+)

Expression


Co-expression Network