LOC118944835


Basic Information

Item Value
gene id LOC118944835
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 38749016 ~ 38756005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966343.1
ATGGAGGGGAGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAGAGTGACGGGATGGAGGGGAACGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAGAGTGACGGGATGGAGGGGAGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAGAGTGACGGGATGGAGGGGAGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAGAGTGATGTGATGGAGGGGAGCGTTCAGAGTGATGGGATTGAGGGGAGCGTTCAGAGTGACGGGATGGAGGGGAGCGTTCAgagtgatgggatggaggggaGCGTTCAGAGTGATAATGCTGTGAGGACTGATGGGATGGAGGGGATCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggagcgttcagagtgacaggatggAGGGGAGCGTTCAGAGTGATAACGCTGTGAGGGGTGATGGGATGGAGGGGAGCGTTCAgagtgatgggatggaggggaGCATTCAGAGTGATAATGCTGTGAGGACTGATGGGATGGAGGGGATCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggagtgttcagagtgatgggatggaggggaGCGTTCAGAGTGATAATGCTGTGAGGACTGATGGGATGGAGGGGATCGTTCAGAGTGATAACGCTGTGAGgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCATTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggagtgttcagagtgatgggatggaggggaGCGTTCAGAGTGATAACGCTGTGAGgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAGAGTGATGTGATGGAGGGGAGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaGCGTTCAgagtgatgggatggaggggaACGTTCAGAGTGATAACGCTGTGAGGACTGATGGGATGGAGGAGAGCGTTCAGAGTGATAACGCTGTGAGTCTGTGTAACGGAAGGCAGAGCCACGggagagacaacaacaaccaccCCAGCCTGTCCTGGGCTGCTGAACTACAGCCACCTGAGCCTGGCCCAGCGTGGCCTGGGCTGCTGAACTACAGCCACTTGAGCCTGGCCCAGCCTGTCCTGGGCTGCTGA

Function

NR:

description
Coiled-coil domain-containing protein 81

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966343.1 True 1533 mRNA 0.58 2 38749016 38756005

Neighbor

gene id symbol gene type direction distance location
LOC110509131 LOC106596891 coding upstream 199530 38534557 ~ 38549486 (+)
LOC110508247 LOC106596897 coding upstream 222096 38292386 ~ 38526926 (+)
LOC110509128 LOC100136478 coding upstream 519778 38211276 ~ 38229238 (+)
LOC110509125 LOC106596905 coding upstream 1054385 37674818 ~ 37694631 (+)
LOC110509126 LOC106596905 coding upstream 1098031 37625498 ~ 37650985 (+)
LOC118944840 LOC106596771 coding downstream 33490 38789495 ~ 39333323 (+)
LOC118944873 LOC106596709 coding downstream 605376 39361381 ~ 39381788 (+)
epb41l3b LOC106596732 coding downstream 628474 39384479 ~ 39484807 (+)
LOC110508249 LOC106596749 coding downstream 736638 39492643 ~ 39494885 (+)
LOC110508250 apcdd1 coding downstream 779511 39535516 ~ 39568919 (+)
G2135121 NA non-coding upstream 586 38748206 ~ 38748430 (+)
G2135119 NA non-coding upstream 7315 38741291 ~ 38741701 (+)
G2135117 NA non-coding upstream 9591 38739215 ~ 38739425 (+)
G2135109 NA non-coding upstream 44898 38703767 ~ 38704118 (+)
G2134873 NA non-coding upstream 58193 38689002 ~ 38690823 (+)
G2135134 NA non-coding downstream 8300 38764305 ~ 38764634 (+)
G2135150 NA non-coding downstream 29767 38785772 ~ 38786032 (+)
G2135163 NA non-coding downstream 49167 38805172 ~ 38810028 (+)
G2135165 NA non-coding downstream 53628 38809633 ~ 38830686 (+)
G2135185 NA non-coding downstream 89035 38845040 ~ 38845285 (+)
G2134434 NA other upstream 605197 38123396 ~ 38143819 (+)
G2134356 NA other upstream 779551 37969103 ~ 37969465 (+)
G2133551 NA other upstream 1710092 37038653 ~ 37038924 (+)
LOC110509112 LOC106597339 other upstream 2223601 36522754 ~ 36528580 (+)
G2135186 NA other downstream 91475 38847480 ~ 38848317 (+)
G2135433 NA other downstream 670842 39426847 ~ 39428093 (+)
G2135679 NA other downstream 1356579 40112584 ~ 40115950 (+)
G2136555 NA other downstream 1927305 40683310 ~ 40684329 (+)

Expression


Co-expression Network