LOC110508251 (gnal)


Basic Information

Item Value
gene id LOC110508251
gene name gnal
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40452316 ~ 40587932 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966056.1
AGCCTAGTTACTGTGTACATACCCCGGGCCTCGAGGACAGCGGCTGAACTGTCAGTTGCGCGTCGGTGTGGAGAGTTACCGCGGTGCCGTGAACCCCTTTCCCACGGGTGATCGCGaatgcttttttatttattttttttaagcagAGGGGCTCTGTTGCACACGCGGTCAATATAAATAGTAAACCACCGAGAATGTGACGACAGCAGGAGTGGACTACCGAGGAAGACTACCGAGGCAGCAGACTGAGCCGTGAATGCAAATGGGAGTAGTGATCGGAGTTGGCAGCAGAAGGGCTAGAAATGATCTATTTTTTTGCTGCGTTTAGTTTGGGTTTTACTTTTGTTTTGGGGATTTCAGACCGTCTATTTGTATAGTTGTAACTTTggacttttttttatttaatattgTTTTAGGGGATCGGTTTAGGCCTTTAGTGTAAGTGACTGATAAGCTGTGTGTAGGCCTGTGTTACCGTGTGATATTACTTGCGATTGACAAGCTACACCCGACATCAGGACAACCCCAACGCACTCGATCCAGCCGACTCTCGGTGGATAGAAAGACCCAAACTTCCTGCCCAGCTTGTCTGGTGCAAACGGAAAATCTCTCTTCGTTTTTTTTAGGGCTGATTAAACCAGCCGCGGGGAAGGTCTTGGGTGACACATGTGATTGTAATGACCCTCCTACCCTTCTCACAGAAATGATACAATGATATGTGAGCGGATTGTAGGTGTGTGTGAGCCAGCTGCAGTGTTACATTGTGGCAGAGGAAGGTTTCTCTGTGGCTCGGTGCACGGCTACTTCCTGGTACAACAGAGAGAGGCAGTGCTGAGTTAAAAACACCAAATAGACACATACTGAGAAGAGGGAAGGAACGAGAGAAACACTTGGCCTGTTTCCAGAAATCTAAACCTTCGTTATCTTGTGTATTTCTCTGTTATTTCAACGATTCGAGTGATTTTGAAGGGGCGAATCAAGAATTAGTTTTGGATGCCGAAGGAAGGTCCCGTTGGTTGCGGGTAAAAAGGAATCGTAACGGGGAGGAAGGAACATAGCCCTCCCAACGGCGGACAAGCGTCGCACAGATTTTCTTTCAcaccattgttttttttttttatacatttattatTATAACATCTTCGTGTATTTAATATTTTTGAGAGACGAGGTTAGTTAACGGAAGATATGGGTTGTTTGGGCAACAGCAAGACTGAAGATCAACGCATCGACGAAAAGGCACAACGAGAGGCgaataaaaaaatagaaaaacagTTACAAAAAGAACGACAAGCATATAAAGCGACGCACCGGCTGTTATTATTGGGTGCTGGAGAGTCCGGGAAAAGTACTATTGTGAAGCAGATGAGGATTCTACACGTCAATGGTTTTAACGCAGAAGAAAAGAAACAGAAAATACAAGATATTCGGAAAAACGTGAAGGACGCGATAGTGACGATAGTGTCAGCCATGAGCACCTTGATACCTCCGGTCTCTCTCGCCAACCCCGAAGACCAGTTCAGAATCGAATACATCAAAAGCATAGCTCCTCTCTCGGACTTTGACTACACACAGGAGTTCTTTGATCATGCCAAGAAGCTGTGGGATGACGAGGGAGTGAAGGCGTGCTTCGAGAGATCCAACGAGTACCAGCTCATCGACTGTGCACAATATTTCCTGGACAGAATTGACTCAGTAAGACAAGGAGACTACACTCCCACAGACCAGGACCTGCTACGATGCAGAGTGTTAACTTCAGGGATATTCGAGACGCGTTTCCAAGTAGACAAAGTCAACTTTCAtaTGTTTGATGTAGGTGgccagagagatgagaggagaaaatgGATCCAATGCTTTAATGatgtgactgccatcatcttTGTGGTTGCCAGCAGCAGCTACAACATGGTCATACGAGAGGACAACAACACCAACAGGCTACGGGAAGCTCTGGATCTCTTCCGCAGTATCTGGAATAACAGGTGGTTACGCACCATCTCGGTCATATTGTTTCTGAACAAGCAGGACATGTTGGCCGAGAAAGTATTAGCTGGGAAATCCAAAATCGAAGACTACTTTCCGGAATATTCTCGCTACACCATACCCAACGAAGCGACTCCTGAACCTGGTGAAGACCCAAAAGTAACAAGAGCTAAGTTCTTCATCCGAGACGAGTTCCTGAGGATCAGCACAGCCAGTGGAGATGGCAGACACTACTGCTACCCCCACTTCACCTGTGCCGTGGACACGGAGAACATCAGGAGAGTCTTCAACGACTGTCGCGATATCATTCAGAGGATGCATCTGAGGCAGTACGAACTCTTGTGATgggatggacagacacacacacacacacacacacacacacacagtacagacgcaaacacacacacacacagctccatcAAGCCTTCTGGGATTTTATTCAACCATTCTGCATCCTCAACCCAAAAAACCAACCcgaccctgccccccccccccgcccctctatGAAGTACTACTGAAGTCTGTCATCCTATTTTTCCTCTTTTTGACAAACGTGTCCTTTTGTTGGAGACTGTTTCATCCCTCCTTTTCACtgataggaaggaaggaaggaaggaa
>XM_036966055.1
TTGGTTTACTTACGGTAAGGTGGACCCGCAGTGTCCAGTATGGTATCAGGTGATCCACTAACTACGGAGCGTAGGCTGACTGGTGAAAAATGCAAAATGACATGTAGCAAATGTTGGAGCATAATTCATTCACCTTTTCGGATCAAATATTGAATTTAATCACATCATTGGAGCTCCAATGTAACGATCTCGTGCTAGACCTGGTACGTGAAGGTggatttttttgtacatttaaaTTGATGAAATACCACATTTGCAGAGGAAAAATATTGGCCACACCAACATGGGGCTGTGCTACAGTTTGCGTCCCCGACTCTTCGGGGACCTGAGCGGGTCTATTTCAAACGCTACCTCGGACTCGGATCAGCCGCCAGACCCAGCTGTACCTTGCCGAGCCGGGGGAACTCGTCAAGAGGACACAGGGGGTTATGGCGAGACCTCGTCGCTCCGAGACGGTAGCAGCCAAGTACGCCATGGGGACACAGTCAAGCTCCCGCCCAGGGAGCCCCGCGGTAGAGACAACACGGGCACCGATGTAGTGCTCATACAGAACGGAGGCGGAGTAGGCAAGGGAACGGGCAAGGACCGCAGTCGACGAATACAGCTGCTGCAGAAAACAACCAGCACCCAAAAACAGAAAAACTGGGACAAACTGctggtggaggagaaggaggccgAGAGGGAGGCAAAGAAAATCAGCAAGAACATTGACAGGGCGTTAAAGGAGCTCAAACGGGAGTACAAACAGACACATCGGCTGCTATTACTGGGTGCTGGAGAGTCCGGGAAAAGTACTATTGTGAAGCAGATGAGGATTCTACACGTCAATGGTTTTAACGCAGAAGAAAAGAAACAGAAAATACAAGATATTCGGAAAAACGTGAAGGACGCGATAGTGACGATAGTGTCAGCCATGAGCACCTTGATACCTCCGGTCTCTCTCGCCAACCCCGAAGACCAGTTCAGAATCGAATACATCAAAAGCATAGCTCCTCTCTCGGACTTTGACTACACACAGGAGTTCTTTGATCATGCCAAGAAGCTGTGGGATGACGAGGGAGTGAAGGCGTGCTTCGAGAGATCCAACGAGTACCAGCTCATCGACTGTGCACAATATTTCCTGGACAGAATTGACTCAGTAAGACAAGGAGACTACACTCCCACAGACCAGGACCTGCTACGATGCAGAGTGTTAACTTCAGGGATATTCGAGACGCGTTTCCAAGTAGACAAAGTCAACTTTCAtaTGTTTGATGTAGGTGgccagagagatgagaggagaaaatgGATCCAATGCTTTAATGatgtgactgccatcatcttTGTGGTTGCCAGCAGCAGCTACAACATGGTCATACGAGAGGACAACAACACCAACAGGCTACGGGAAGCTCTGGATCTCTTCCGCAGTATCTGGAATAACAGGTGGTTACGCACCATCTCGGTCATATTGTTTCTGAACAAGCAGGACATGTTGGCCGAGAAAGTATTAGCTGGGAAATCCAAAATCGAAGACTACTTTCCGGAATATTCTCGCTACACCATACCCAACGAAGCGACTCCTGAACCTGGTGAAGACCCAAAAGTAACAAGAGCTAAGTTCTTCATCCGAGACGAGTTCCTGAGGATCAGCACAGCCAGTGGAGATGGCAGACACTACTGCTACCCCCACTTCACCTGTGCCGTGGACACGGAGAACATCAGGAGAGTCTTCAACGACTGTCGCGATATCATTCAGAGGATGCATCTGAGGCAGTACGAACTCTTGTGATgggatggacagacacacacacacacacacacacacacacacagtacagacgcaaacacacacacacacagctccatcAAGCCTTCTGGGATTTTATTCAACCATTCTGCATCCTCAACCCAAAAAACCAACCcgaccctgccccccccccccgcccctctatGAAGTACTACTGAAGTCTGTCATCCTATTTTTCCTCTTTTTGACAAACGTGTCCTTTTGTTGGAGACTGTTTCATCCCTCCTTTTCACtgataggaaggaaggaaggaaggaa

Function

symbol description
gnal Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in brain; gill; head; and peripheral olfactory organ. Human ortholog(s) of this gene implicated in dystonia 25. Orthologous to human GNAL (G protein subunit alpha L).

NR:

description
guanine nucleotide-binding protein G(olf) subunit alpha isoform X1

GO: NA

KEGG:

id description
K04632 GNAS; guanine nucleotide-binding protein G(s) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966056.1 False 2604 mRNA 0.46 11 40452316 40563499
XM_036966055.1 True 2047 mRNA 0.49 11 40452316 40587932

Neighbor

gene id symbol gene type direction distance location
LOC110508253 LOC106591876 coding downstream 134805 40168411 ~ 40317511 (-)
LOC110509140 LOC106596615 coding downstream 325115 40115401 ~ 40127201 (-)
LOC110508256 LOC106596607 coding downstream 349168 39973367 ~ 40103148 (-)
ndufv2 ndufv2 coding downstream 582380 39843311 ~ 39869936 (-)
LOC110509145 ankrd12 coding downstream 623109 39778552 ~ 39829207 (-)
LOC118944871 NA coding upstream 9328 40597260 ~ 40599320 (-)
LOC118944865 NA coding upstream 17284 40605216 ~ 40608134 (-)
zfyve9a LOC106930947 coding upstream 96459 40684391 ~ 40740806 (-)
LOC118944846 NA coding upstream 160584 40748516 ~ 40750815 (-)
LOC110509159 LOC106596360 coding upstream 164346 40752278 ~ 40758925 (-)
G2137056 NA non-coding downstream 687 40450435 ~ 40451629 (-)
G2137092 NA non-coding downstream 29253 40422365 ~ 40423063 (-)
G2137088 NA non-coding downstream 33261 40418854 ~ 40419055 (-)
G2137087 NA non-coding downstream 36122 40415982 ~ 40416194 (-)
G2137084 NA non-coding downstream 44472 40407631 ~ 40407844 (-)
G2137179 NA non-coding upstream 35627 40623559 ~ 40623874 (-)
G2137181 NA non-coding upstream 37151 40625083 ~ 40625285 (-)
G2137184 NA non-coding upstream 55558 40643490 ~ 40643825 (-)
G2137187 NA non-coding upstream 58964 40646896 ~ 40647105 (-)
G2137188 NA non-coding upstream 59818 40647750 ~ 40648058 (-)
G2137086 NA other downstream 36776 40415303 ~ 40415540 (-)
G2136243 NA other downstream 330417 40051639 ~ 40121899 (-)
G2136189 NA other downstream 506482 39943153 ~ 39945834 (-)
G2137419 NA other upstream 672868 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 1042729 41630582 ~ 41641166 (-)
G2137555 NA other upstream 1143782 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 1222863 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1632990 42220922 ~ 42226965 (-)

Expression


Co-expression Network