LOC118944871


Basic Information

Item Value
gene id LOC118944871
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40597260 ~ 40599320 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040272.1
GTTTCATGCGTCTGAAAGTACCGCATTGTAGCCCTCGCATCAATTTCCGCCGTGAGTTTGACTTCCGGTCTGTTGCGATGAATCGCTTGCTCAGGGAGCGAGGACATGTTTctaaatatgaataaaaaaaaataaattaactAAAGGCGTTCTTGAGAAAAATGGAGGAAGAAATTATAACGACATTTTCCCAAATAGCATTACAACTACAAAGCTGGCGCTGGCTAGCTAGCTTATTTTCATTACAATAGCATGGCTAGTTAGCAATAGTCTTCTGTCTAGACTGTAACTAATGGTTGTTGCGTTGTTGGAACAGAGCAATAGTTCGTTGTACTTGTCATTTGGTTGAGACTAATATTAGTTTAGAAAATAATTGTTTACATTGTGCAATTGGTTGGCTTTGCTAGTTAGCAAGCTGAGATTTATTTGCTCATGTTGGCTAATCTAACTATTAGCAAATTGTTTAGGACAACAGGTTAGCGCCTTGCATAAATCTAGACAATAGAGAATGGGGAATAAGATCTGTCTGTTGCAGTGCCCAGACCAGGTGAGAGCCAACTGCTACAGAGATAAAAAGCCACAACATGATGATCAGGAGGTCAAAGCATCTGAAGAAGAGGACAAAAGCCTGCTTTGGATGAGCAAGCTAGAACAATAACAACTAGCTATATCAGATAAACATGTCTAGGAGAAGCAGGGCGAGAGCAAGCTAGTAGTAGTAACATTATTTGAAACCTCACATGCATCTGTGTTATATTTAagtaataaggcacctcaggggtttgtggtatatggacaatataccacggcttaGGGCTGTATATGCGTTGCGtcatgcctggatacagcccttagccgtggtatattggccatatactacaaATCCCCAAGGTTACCAACGTAAttgcaacagtaaacatgtaatATTGACTCATACCCGGGgtgtacggtctgatataccatgtcTTGTTATCTGTCTCATGTTGTACTGGTCATCAACATGAACAAGACTGAATTCGGTTGAATTGTCAACTGGTCTAAATTCTTATTAGGAAGATGTTGCTGTTCAGAATGACATGTTTATGACTGTTCACAGGAATCTCCAAATGCTAAGTTGAACGAGCACCACGgatgaaggagggggaggaaaacaGACAGCTTCTTTCTCCCACATTTTCACCAAGGCATACAATGTTTGCTTCATGAACAATTGTTACATCTGAAATGAATACAGAATTATTTTAGTTTATTCTGTTTCCGTTTTTTATGCTGGATGTGAGTAATTTAGCAGGTCTATAGTATGTAttgtttttaaacatttattaaatATCTCAGTCAAAACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040272.1 True 1343 mRNA 0.39 2 40597260 40599320

Neighbor

gene id symbol gene type direction distance location
LOC110508251 gnal coding downstream 9328 40452316 ~ 40587932 (-)
LOC110508253 LOC106591876 coding downstream 279749 40168411 ~ 40317511 (-)
LOC110509140 LOC106596615 coding downstream 470059 40115401 ~ 40127201 (-)
LOC110508256 LOC106596607 coding downstream 494112 39973367 ~ 40103148 (-)
ndufv2 ndufv2 coding downstream 727324 39843311 ~ 39869936 (-)
LOC118944865 NA coding upstream 5896 40605216 ~ 40608134 (-)
zfyve9a LOC106930947 coding upstream 85071 40684391 ~ 40740806 (-)
LOC118944846 NA coding upstream 149196 40748516 ~ 40750815 (-)
LOC110509159 LOC106596360 coding upstream 152958 40752278 ~ 40758925 (-)
LOC110508261 dnajb4 coding upstream 184286 40783606 ~ 40842867 (-)
G2137144 NA non-coding downstream 25062 40571887 ~ 40572198 (-)
G2137139 NA non-coding downstream 36963 40559920 ~ 40560297 (-)
G2137130 NA non-coding downstream 63862 40530263 ~ 40533398 (-)
G2137120 NA non-coding downstream 88505 40501355 ~ 40508755 (-)
G2137111 NA non-coding downstream 121559 40472088 ~ 40475701 (-)
G2137179 NA non-coding upstream 24239 40623559 ~ 40623874 (-)
G2137181 NA non-coding upstream 25763 40625083 ~ 40625285 (-)
G2137184 NA non-coding upstream 44170 40643490 ~ 40643825 (-)
G2137187 NA non-coding upstream 47576 40646896 ~ 40647105 (-)
G2137188 NA non-coding upstream 48430 40647750 ~ 40648058 (-)
G2137086 NA other downstream 181720 40415303 ~ 40415540 (-)
G2136243 NA other downstream 475361 40051639 ~ 40121899 (-)
G2136189 NA other downstream 651426 39943153 ~ 39945834 (-)
G2137419 NA other upstream 661480 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 1031341 41630582 ~ 41641166 (-)
G2137555 NA other upstream 1132394 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 1211475 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1621602 42220922 ~ 42226965 (-)

Expression


Co-expression Network