LOC118944846



Basic Information


Item Value
gene id LOC118944846
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40748516 ~ 40750815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005040222.1
ctctctctcaatacaccccagacctcccctctctctcaatacACCCcagacctcccctctctctctctgcacaacTGCTGTTGAAGGAACAACATCGTCCAGTATTTTAGCCTCAAGACAAATCAAACTGGtgttgtcccaaatggctccctcttcactacttttaaccaggccCCATCGGGGAttttagtcaaaagtagtgtacagtGTAGTTGAGAATAGTTGACCATTTTGGTACGGCGCCAGTTTACCGACCAACCACCAATTGTAACACAGCAATCCATGTCTCGTATTTTAACAGGCGATcctattaatgtctacattcccTGAATGACGAGGGCACCAAGTACTCCATCCAGAATGATCCCCTGTCTAGTGCACTACGTTTTGATTAGAGCAAAGGGAGTATATCTATCAGACATGAAGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGTCTAGGCCTTACTGTAGGATGTCACCAGGTCCTGGTGTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCACCAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCACCAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGATGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGtcaccaggccctggtctaggCCTTACTGTAGGATGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGtcaccaggccctggtctaggCCTTACTGTAGGATGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGATGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCCGGTCTAGGCCTTACTGTAGGGTGTCAACAGGTCCTGGTCTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTGTAGGCCTTACTGTAGGATGTCAACAGGTCCTGGTGTAGGTCTTACTGTAGGATGTCAACAGGTCCCAGCCCTGCCAGACATCACTCGtcttatacaaaaaaaaaatatttctcctGTTTATTAAAAACCAAATAAATCTGTGATCATGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005040222.1 True 2265 mRNA 0.52 2 40748516 40750815

Neighbor


gene id symbol gene type direction distance location
zfyve9a LOC106930947 coding downstream 7710 40684391 ~ 40740806 (-)
LOC118944865 NA coding downstream 140382 40605216 ~ 40608134 (-)
LOC118944871 NA coding downstream 149196 40597260 ~ 40599320 (-)
LOC110508251 gnal coding downstream 160584 40452316 ~ 40587932 (-)
LOC110508253 LOC106591876 coding downstream 431005 40168411 ~ 40317511 (-)
LOC110509159 LOC106596360 coding upstream 1463 40752278 ~ 40758925 (-)
LOC110508261 dnajb4 coding upstream 32791 40783606 ~ 40842867 (-)
LOC110509157 dnajb4 coding upstream 116464 40867279 ~ 40872210 (-)
ak5 LOC102787869 coding upstream 300256 41051071 ~ 41200160 (-)
LOC110509184 LOC103370426 coding upstream 526186 41277001 ~ 41391686 (-)
G2137217 NA non-coding downstream 7334 40740904 ~ 40741182 (-)
G2137215 NA non-coding downstream 21359 40725808 ~ 40727157 (-)
G2137211 NA non-coding downstream 27971 40712134 ~ 40720545 (-)
G2137212 NA non-coding downstream 31834 40714868 ~ 40716682 (-)
G2137235 NA non-coding upstream 38983 40789798 ~ 40790113 (-)
G2137249 NA non-coding upstream 93431 40844246 ~ 40848706 (-)
G2137070 NA non-coding upstream 111866 40862681 ~ 40863721 (-)
G2137265 LOC106569753 non-coding upstream 129954 40880769 ~ 40883372 (-)
G2137300 NA non-coding upstream 232856 40983671 ~ 40985567 (-)
G2137111 NA other downstream 272815 40472088 ~ 40475701 (-)
G2137086 NA other downstream 332976 40415303 ~ 40415540 (-)
G2136243 NA other downstream 626617 40051639 ~ 40121899 (-)
LOC110508256 LOC106596607 other downstream 751470 39973367 ~ 40103148 (-)
G2136189 NA other downstream 802682 39943153 ~ 39945834 (-)
G2137419 NA other upstream 509985 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 879846 41630582 ~ 41641166 (-)
G2137555 NA other upstream 980899 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 1059980 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1470107 42220922 ~ 42226965 (-)

Expression



Co-expression Network