LOC110508261 (dnajb4)


Basic Information

Item Value
gene id LOC110508261
gene name dnajb4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40783606 ~ 40842867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966534.1
GCGTTCCCAGCATATTGAAACAGAGGCGCAGTTGTCTGACAGAGTTGAGAGATACAGTAAGATAGATACAGTACGATAGACACAACGAGGAAAACATCGCGTCGCACGTTCGCCACCTACCTGTTGAATATCACCGCCGTTTAATTTGCAAGTTTGGGGTTGGGTTGACGAGTCACTCACTGTCGAAGAACAAAGTCGAACCTGGAAAAAGGAGAGTCAGTCGAGGTTTTGTCGAGGTAAATGCGGAAGGAAAGAGGATTTGTGCAACTGGTAGCCACTCCAATGTTCTAACCGGACCGACAGACCAAAGGATTTATCAACCGATCAAACCGATTTATTGACGCCAAAAAACCACAATGCCTTTAGGACTGAGGAGAAAGAAGAACAAGTCGAGAGAGAGCTCGAACCTGGTGGAGAATGAGGAGGTCGGTGGACACGCAACTGGGAGCTCCGTGAAGTCGACCGTAAACGGAGCGGGGCTCCCACCGCCACCTGCCAACCTGCGGCCCAAACTAGTGTTCCACACTCAGCTCGCCCACGGCAGCCCCACGGGAAGGATCGAGGGATTTAGTAACGTCAAAGAACTCTACGGGAAAATAGCTGATACGTTCAATTTAAGTCCACCAgagatccTGTTCTGTACATTGAACACCCATAAGATCGACATGGAGAAGCTGCTTGGTGGTCAGATCGGCCTGGAGGACTTTATATTTGCCCACATTAAAGGGATTAAGAAGGAGGTGGAGGTGTTTAAATCAGAGGAGGCCCTGGGCCTCACCATCACAGACAACGGGGCGGGATACGCCTTCATCAagCGAATCAAGGAGGGCAGTGTGGTGGACAATGTGAAGGTGATCTCTGTTGGAGACCACATAGAGTGCATCAACGGGAAGAACATTGTGGGAACACGGCACTACGAGGTGGCTCGCATGCTGAAGGAGCTGCCTAAGGAGCAGAAGTTCACCCTCAAACTGGTGGAGCCTATGAAGGCCTTCGAGATGCTGGAGCCGAGGTCGAAGGGAGCCAAGCCGGCCAGTGAGAATAAGttggggacagggagagggactcTGAGACTGCGCGCCAAAGGACCTGCTACCGTAGAGGAAGTGCCGACAGAGTTTGAGGAGAAAGCAGTGAAGAAGGTGGATGACTTACTGGAGAGCTACATGGGTATCAGAGATACAGAACTGGCGGCGACCATGGTGGAGGTGGGTCGGGACAAGAAGAACCCTGATGAGTTTGCCATGGCTCTGGACGAAGCTCTCGGAGACTTTGCCTTCCCTGACGAGTTTGTGTTCGACGTCTGGGGCGCCATTGGAGATGCCAAACAGGGACGTCTTTAATGTTTTAACTGATTACCCAGGTCACCTAGCCCGGtccaagacagcacaaacacatctgggaccaggctaccaaCCCCTGTTCCAGTGGACAAATATCAGCCAGTAGAGAATGAGGGGtgggaattaccagggacctcacgcaTTGCGATTCCATAATGTGATTTTATTCCAATTTGATGTTCccgaacatattgctcactaAATGTCTGCTGCAGAAGGACAAGTGCTAGAGAATGAGGAAATTAGTTTtaaatcagtcatggaaataagtggtCACTATGTTAAAAGATGGAGAAGAAACTATAGGATGGAAAATACCAGAATTTTGGCGCAGGTACATCCGACTAACGCTAGCTAACACTACCTTTGAAAAGGAAAAATCGATACTTAGAGTCAAAGTATCTACATAATACGgtccaaaataatattgtgatatgtAACTATCGATTCTATTCccctattgttattattatatacaCCCTCGAAGACAGAATCACTTATTGATCAGTCATGTCCCACTCAGTTCtctgggatgcatcccaaatgggcaccctattccctacatagtgcactacttggcaccctattccctacacagtgcactacttggcaccctattccctacatagtgcactacttggcaccctattt

Function

symbol description
dnajb4 Predicted to enable chaperone binding activity and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in cytosol. Orthologous to human DNAJB4 (DnaJ heat shock protein family (Hsp40) member B4).

NR:

description
PREDICTED: dnaJ homolog subfamily B member 4 isoform X3

GO: NA

KEGG:

id description
K20056 GIPC, SEMCAP; PDZ domain-containing protein GIPC

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966534.1 True 1994 mRNA 0.49 6 40783606 40842867

Neighbor

gene id symbol gene type direction distance location
LOC110509159 LOC106596360 coding downstream 24681 40752278 ~ 40758925 (-)
LOC118944846 NA coding downstream 32791 40748516 ~ 40750815 (-)
zfyve9a LOC106930947 coding downstream 42800 40684391 ~ 40740806 (-)
LOC118944865 NA coding downstream 175472 40605216 ~ 40608134 (-)
LOC118944871 NA coding downstream 184286 40597260 ~ 40599320 (-)
LOC110509157 dnajb4 coding upstream 24412 40867279 ~ 40872210 (-)
ak5 LOC102787869 coding upstream 208204 41051071 ~ 41200160 (-)
LOC110509184 LOC103370426 coding upstream 434134 41277001 ~ 41391686 (-)
LOC118944905 NA coding upstream 689747 41532614 ~ 41532745 (-)
LOC110509161 rs8 coding upstream 690104 41532971 ~ 41536197 (-)
G2137217 NA non-coding downstream 42424 40740904 ~ 40741182 (-)
G2137215 NA non-coding downstream 56449 40725808 ~ 40727157 (-)
G2137211 NA non-coding downstream 63061 40712134 ~ 40720545 (-)
G2137212 NA non-coding downstream 66924 40714868 ~ 40716682 (-)
G2137249 NA non-coding upstream 1379 40844246 ~ 40848706 (-)
G2137070 NA non-coding upstream 19814 40862681 ~ 40863721 (-)
G2137265 LOC106569753 non-coding upstream 37902 40880769 ~ 40883372 (-)
G2137300 NA non-coding upstream 140804 40983671 ~ 40985567 (-)
G2137318 NA non-coding upstream 149414 40992281 ~ 40993069 (-)
G2137111 NA other downstream 307905 40472088 ~ 40475701 (-)
G2137086 NA other downstream 368066 40415303 ~ 40415540 (-)
G2136243 NA other downstream 661707 40051639 ~ 40121899 (-)
LOC110508256 LOC106596607 other downstream 786560 39973367 ~ 40103148 (-)
G2136189 NA other downstream 837772 39943153 ~ 39945834 (-)
G2137419 NA other upstream 417933 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 787794 41630582 ~ 41641166 (-)
G2137555 NA other upstream 888847 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 967928 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1378055 42220922 ~ 42226965 (-)

Expression


Co-expression Network