LOC110509157 (dnajb4)


Basic Information

Item Value
gene id LOC110509157
gene name dnajb4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40867279 ~ 40872210 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590126.2
GTGAAGAGCCCCTGGATAACAGCGAGCAACGCCGCAGGTGGGTCGGACGCAGGAGAGGGAGCCACAGCTATTTAAAGGGAGTCTAACGGGGGAGGGTGATGGATAAATAACCCAGGATCCACAGCGCTGAGTAACCACTCTAAACATCGCTACATCACATCCCGTTCTCTAGTTTCTCACGATTCAACCTCCTCTGTCTCCGTGTCTATCTACTAGTTATTGTTGtttagagaggcagagagaagcgGTTCAGGGGTTTTCTTTCGCTTGTCGCCGTATCAACTTCCTCAGAGGGGTTtgtcttgtctctcctctcctggatATATTTCCCCATCAAACTAACAGGCAGCTTCCGTAGAACAGCGGCAGCTTCTCTTTGACTACTGCGAGGGGCCGCTTCGGGGGAACTATGGGGAAAGACTATTATAAAATCCTGGGGATAGTGAAAGGAGCGGCTGACGAGGACATTAAAAAGGCGTACAGAAAAcaggctctgaaatggcacccggACAAAAACAAAGCGGCCAACGCCGAGGAGAAATTTAAGGAGATCGCAGAGGCATATGAAGTCCTCAGTGATCCGAAGAAAAGGGAGATCTATGATCAGTACGGAGAAGAAGGTCTCAAAGGAGGTGGCGGCCCCGGCAACGGTCCAGACGGACAGGGCAGCAACTTCACCTCTTACACGTTCCACGGCGACCCCCATGCTACCTTCGCCACCTTCTTCGGCGGCGCCAACCCGTTCGAGATGTTCTTCGGCCGTAAGGCCAACGGACGCGGTCCAGGCGGCGGGGACGACGAGGACATGGAGGTGGACGGCAACGACCCGTTCGGCTCGTTCACCTCGTTTAACCTCAACGGGTTCCCTCGGGACCGCCACGTGGGGCTGGGCGGGCAGCAGAGGAGGAAGCAGGACCCGGCCGTCCATCACGAGCTGCGGGTATCGCTGGAGGAAGTGTTTCATGGTTGCACCAAGAGGATGAAGATCAGCAGGAAGAGGATGAACCCTGACGGACGGACCATGAGGACGGAGGATAAGATTCTCACCATAGAGATTAAGAGAGGGTGGAAGGAGGGGACCAAGATCACGTTCCCCAGAGAAGGAGACGAGTCGCCCAATACCATCCCTGCTGATATTGTGTTCGTCATCAAGGACAAGCCCCACATGCACTTTAGAAGGGAGGGGTCGGACATCGTGTACCCGGTGAAAGTTAGTCTACGACAGtCGTTGTGCGGTTGCTCTGTGACGGTGTCTACGATAGACGGGAAGACGTGTAACATGAAGATCACGGATGTGATAAAGCCAGGCATGAAACAGACTGTAGCAGGACAGGGCCTCCCCTTACCCAAGAACCCCGAGCAGAGAGGTGACCTGGTGGTGGAGTTTGACGTCAACTTTCCAGAGAACCTCCCCAGCAACGCCAAGGATGTCCTGAAGAGGCATTTACCTGTATCCTAGAAGAACAGACAtggatacagacacagacacacggacacaccTGGACAACAGAAAGAAAGGGGTGACATCAGCATGCCAGCTCtcacactctcctcctcctcttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctc

Function

symbol description
dnajb4 Predicted to enable chaperone binding activity and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in cytosol. Orthologous to human DNAJB4 (DnaJ heat shock protein family (Hsp40) member B4).

NR:

description
dnaJ homolog subfamily B member 4-like

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09510 DNAJB4; DnaJ homolog subfamily B member 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590126.2 True 1629 mRNA 0.54 3 40867279 40872210

Neighbor

gene id symbol gene type direction distance location
LOC110508261 dnajb4 coding downstream 24412 40783606 ~ 40842867 (-)
LOC110509159 LOC106596360 coding downstream 108354 40752278 ~ 40758925 (-)
LOC118944846 NA coding downstream 116464 40748516 ~ 40750815 (-)
zfyve9a LOC106930947 coding downstream 126473 40684391 ~ 40740806 (-)
LOC118944865 NA coding downstream 259145 40605216 ~ 40608134 (-)
ak5 LOC102787869 coding upstream 178861 41051071 ~ 41200160 (-)
LOC110509184 LOC103370426 coding upstream 404791 41277001 ~ 41391686 (-)
LOC118944905 NA coding upstream 660404 41532614 ~ 41532745 (-)
LOC110509161 rs8 coding upstream 660761 41532971 ~ 41536197 (-)
LOC118944899 NA coding upstream 662282 41534492 ~ 41534560 (-)
G2137070 NA non-coding downstream 3558 40862681 ~ 40863721 (-)
G2137249 NA non-coding downstream 18573 40844246 ~ 40848706 (-)
G2137235 NA non-coding downstream 77166 40789798 ~ 40790113 (-)
G2137217 NA non-coding downstream 126097 40740904 ~ 40741182 (-)
G2137215 NA non-coding downstream 140122 40725808 ~ 40727157 (-)
G2137265 LOC106569753 non-coding upstream 8559 40880769 ~ 40883372 (-)
G2137300 NA non-coding upstream 111461 40983671 ~ 40985567 (-)
G2137318 NA non-coding upstream 120071 40992281 ~ 40993069 (-)
G2137321 NA non-coding upstream 126503 40998713 ~ 40999393 (-)
G2137329 NA non-coding upstream 145374 41017584 ~ 41018423 (-)
G2137111 NA other downstream 391578 40472088 ~ 40475701 (-)
G2137086 NA other downstream 451739 40415303 ~ 40415540 (-)
G2136243 NA other downstream 745380 40051639 ~ 40121899 (-)
LOC110508256 LOC106596607 other downstream 870233 39973367 ~ 40103148 (-)
G2136189 NA other downstream 921445 39943153 ~ 39945834 (-)
G2137419 NA other upstream 388590 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 758451 41630582 ~ 41641166 (-)
G2137555 NA other upstream 859504 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 938585 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1348712 42220922 ~ 42226965 (-)

Expression


Co-expression Network