znf414 (znf414)


Basic Information

Item Value
gene id znf414
gene name znf414
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 41587299 ~ 41626840 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967116.1
TCCGAAATGCCGTAACCCGGAAGTACTTTTTTGATGTTGTCGACGAGACGCTGGTAAATGAACCATCAACGTTTTCCTTCTTGCTCACAAAATGGTCAACGATAAATATTGATAATCCTAATTGCAAATGGGCTATGTCTGAACTAGTGAGACTGCTGTCGTCTTCTCCCATACCGCCAGTTGACCGCTCGTCCCCCACCACCATGTCTACGGGGATGGCCTCTGCACCTCTACTGCAGCCTACTAGCAACACAACCCAAGgtcAGAGAATGCCCTGCACGTTATACGGCTGCCATCGTGTCTACACGGACACAGACAGCCTGGCCAAACACATCAAGGACCATCAGAATCACATCCCCACTCAGTCCCTCCCAGgTAAAGTGTTCCTCTGCTCCTTCATCGGCTGCAACGGCTCCTTTCCCAGCATGCAGCATCTGATGGAACATATGAGACAGCACCACAAACCCAATACGTACTTCCTGTGTCAGAGTTGTCGGTCCAAGCTGCGCTCCTACCGCGCCCTCCTCAAACACCTCCACACCTGCGCTAAGGTAGCCAAGAGTAAGGCCAAGGCTGACGAGCAGGCAGAGGTCAAGCCGGACCCTGACCCCGATGCTGCTGTTCCCATGGCTACAGACCAGGAGACCCCACAGCAGCAAGAGCCCATGGAGTCCGAGCCCTCCAACCCTGTCCATGAGTCTACCGCGTCTGACCATCTCTCTCCCCAGGCTCCCTCCCCCTACCAGCCCCCAGAGGATGGATCTCTCCTTGGCCTGGACCTCAACTCGGGCCTGCTCCCTGGGGCTTTCTCCCTCCaggagggaggtggtggggggTTGTCAGACACCCAGCCCCCAGGCCTCAAAGACCAGCTCCCTGAGGGATCCTATGGCTCCTTCTCACAGTACCTTCAATCTCCACTGGAAGTTTCTGGACCGGCACTGCAGCAACAACAGCAGAGGCCCCCCAGGCCCGTCCCTTCGGCTCTACCTTCCTCTCCGCCCCCCCAGACCTCCACCCCGCCCGGCTCGAACGCTCGCTGGAGGAAGAACCAAGGTCAGTCCTTCAACGGCCGTATTCTATGGAAACACACCAGGGGGCGCTACAGCTGTGTCCAGTGTGGCCACGCCACCCCAAACAGGAAGGAGATGACCGCCCACATCAAGGGCCAACACAAGAGCCCTGCTGCCAAGCCTGATGACCGTGTGCCCTCTTCACAGACCAAAGGGTCTTCAGAGACAGAGGCTAGCACCTACACCTGTCTCTGACTCGCCGGCCACATGGGAGGAAACGGTTAAATAATATGGTGTTTAGTGGAACTAGTTTCATCTCTTTATTTTCCTGTGAAAGTGATTAATTTCAATAAACATAATTAACTTGA
>XM_036967117.1
TTCCGAAATGCCGTAACCCGGAAGTACTTTTTTGATGTTGTCGACGAGACGCTGGTAAATGAACCATCAACGTTTTCCTTCTTGCTCACAAAATGGTCAACGATAAATATTGATAATCCTAATTGCAAATGGGCTATGTCTGAACTAGTGAGACTGCTGTCGTCTTCTCCCATACCGCCAGTTGACCGCTCGTCCCCCACCACCATGTCTACGGGGATGGCCTCTGCACCTCTACTGCAGCCTACTAGCAACACAACCCAAGgtcAGAGAATGCCCTGCACGTTATACGGCTGCCATCGTGTCTACACGGACACAGACAGCCTGGCCAAACACATCAAGGACCATCAGAATCACATCCCCACTCAGTCCCTCCCAGgTAAAGTGTTCCTCTGCTCCTTCATCGGCTGCAACGGCTCCTTTCCCAGCATGCAGCATCTGATGGAACATATGAGACAGCACCACAAACCCAATACGTACTTCCTGTGTCAGAGTTGTCGGTCCAAGCTGCGCTCCTACCGCGCCCTCCTCAAACACCTCCACACCTGCGCTAAGGTAGCCAAGAGTAAGGCCAAGGCTGACGAGCAGGCAGAGGTCAAGCCGGACCCTGACCCCGATGCTGCTGTTCCCATGGCTACAGACCAGGAGACCCCACAGCAGCAAGAGCCCATGGAGTCCGAGCCCTCCAACCCTGTCCATGAGTCTACCGCGTCTGACCATCTCTCTCCCCAGGCTCCCTCCCCCTACCAGCCCCCAGAGGATGGATCTCTCCTTGGCCTGGACCTCAACTCGGGCCTGCTCCCTGGGGCTTTCTCCCTCCaggagggaggtggtggggggTTGTCAGACACCCAGCCCCCAGGCCTCAAAGACCAGCTCCCTGAGGGATCCTATGGCTCCTTCTCACAGTACCTTCAATCTCCACTGGAAGTTTCTGGACCGGCACTGCAGCAACAACAGCAGAGGCCCCCCAGGCCCGTCCCTTCGGCTCTACCTTCCTCTCCGCCCCCCCAGACCTCCACCCCGCCCGGCTCGAACGCTCGCTGGAGGAAGAACCAAGACGCTCCGGGGTCTCTAAGACACAGATggacctctcctcctccagccaaTCACAGGTTAACTAGAGATGGAGCGCAGGTCAGTCCTTCAACGGCCGTATTCTATGGAAACACACCAGGGGGCGCTACAGCTGTGTCCAGTGTGGCCACGCCACCCCAAACAGGAAGGAGATGACCGCCCACATCAAGGGCCAACACAAGAGCCCTGCTGCCAAGCCTGATGACCGTGTGCCCTCTTCACAGACCAAAGGGTCTTCAGAGACAGAGGCTAGCACCTACACCTGTCTCTGACTCGCCGGCCACATGGGAGGAAACGGTTAAATAATATGGTGTTTAGTGGAACTAGTTTCATCTCTTTATTTTCCTGTGAAAGTGATTAATTTCAATAAACATAATTAACTTGA
>XM_036967118.1
CATTTCCGAAATGCCGTAACCCGGAAGTACTTTTTTGATGTTGTCGACGAGACGCTGGTAAATGAACCATCAACGTTTTCCTTCTTGCTCACAAAATGGTCAACGATAAATATTGATAATCCTAATTGCAAATGGGCTATGGTAGTCTGAACTAGTGAGACTGCTGTCGTCTTCTCCCATACCGCCAGTTGACCGCTCGTCCCCCACCACCATGTCTACGGGGATGGCCTCTGCACCTCTACTGCAGCCTACTAGCAACACAACCCAAGgtcAGAGAATGCCCTGCACGTTATACGGCTGCCATCGTGTCTACACGGACACAGACAGCCTGGCCAAACACATCAAGGACCATCAGAATCACATCCCCACTCAGTCCCTCCCAGgTAAAGTGTTCCTCTGCTCCTTCATCGGCTGCAACGGCTCCTTTCCCAGCATGCAGCATCTGATGGAACATATGAGACAGCACCACAAACCCAATACGTACTTCCTGTGTCAGAGTTGTCGGTCCAAGCTGCGCTCCTACCGCGCCCTCCTCAAACACCTCCACACCTGCGCTAAGGTAGCCAAGAGTAAGGCCAAGGCTGACGAGCAGGCAGAGGTCAAGCCGGACCCTGACCCCGATGCTGCTGTTCCCATGGCTACAGACCAGGAGACCCCACAGCAGCAAGAGCCCATGGAGTCCGAGCCCTCCAACCCTGTCCATGAGTCTACCGCGTCTGACCATCTCTCTCCCCAGGCTCCCTCCCCCTACCAGCCCCCAGAGGATGGATCTCTCCTTGGCCTGGACCTCAACTCGGGCCTGCTCCCTGGGGCTTTCTCCCTCCaggagggaggtggtggggggTTGTCAGACACCCAGCCCCCAGGCCTCAAAGACCAGCTCCCTGAGGGATCCTATGGCTCCTTCTCACAGTACCTTCAATCTCCACTGGAAGTTTCTGGACCGGCACTGCAGCAACAACAGCAGAGGCCCCCCAGGCCCGTCCCTTCGGCTCTACCTTCCTCTCCGCCCCCCCAGACCTCCACCCCGCCCGGCTCGAACGCTCGCTGGAGGAAGAACCAAGGTCAGTCCTTCAACGGCCGTATTCTATGGAAACACACCAGGGGGCGCTACAGCTGTGTCCAGTGTGGCCACGCCACCCCAAACAGGAAGGAGATGACCGCCCACATCAAGGGCCAACACAAGAGCCCTGCTGCCAAGCCTGATGACCGTGTGCCCTCTTCACAGACCAAAGGGTCTTCAGAGACAGAGGCTAGCACCTACACCTGTCTCTGACTCGCCGGCCACATGGGAGGAAACGGTTAAATAATATGGTGTTTAGTGGAACTAGTTTCATCTCTTTATTTTCCTGTGAAAGTGATTAATTTCAATAAACATAATTAACTTGA
>XM_036967120.1
caTATTTTCTTTTTCTTTTGAACATTTCCGAAATGCCGTAACCCGGAAGTACTTTTTTGATGTTGTCGACGAGACGCTGGTAAATGAACCATCAACGTTTTCCTTCTTGCTCACAAAATGGTAGTCTGAACTAGTGAGACTGCTGTCGTCTTCTCCCATACCGCCAGTTGACCGCTCGTCCCCCACCACCATGTCTACGGGGATGGCCTCTGCACCTCTACTGCAGCCTACTAGCAACACAACCCAAGgtcAGAGAATGCCCTGCACGTTATACGGCTGCCATCGTGTCTACACGGACACAGACAGCCTGGCCAAACACATCAAGGACCATCAGAATCACATCCCCACTCAGTCCCTCCCAGgTAAAGTGTTCCTCTGCTCCTTCATCGGCTGCAACGGCTCCTTTCCCAGCATGCAGCATCTGATGGAACATATGAGACAGCACCACAAACCCAATACGTACTTCCTGTGTCAGAGTTGTCGGTCCAAGCTGCGCTCCTACCGCGCCCTCCTCAAACACCTCCACACCTGCGCTAAGGTAGCCAAGAGTAAGGCCAAGGCTGACGAGCAGGCAGAGGTCAAGCCGGACCCTGACCCCGATGCTGCTGTTCCCATGGCTACAGACCAGGAGACCCCACAGCAGCAAGAGCCCATGGAGTCCGAGCCCTCCAACCCTGTCCATGAGTCTACCGCGTCTGACCATCTCTCTCCCCAGGCTCCCTCCCCCTACCAGCCCCCAGAGGATGGATCTCTCCTTGGCCTGGACCTCAACTCGGGCCTGCTCCCTGGGGCTTTCTCCCTCCaggagggaggtggtggggggTTGTCAGACACCCAGCCCCCAGGCCTCAAAGACCAGCTCCCTGAGGGATCCTATGGCTCCTTCTCACAGTACCTTCAATCTCCACTGGAAGTTTCTGGACCGGCACTGCAGCAACAACAGCAGAGGCCCCCCAGGCCCGTCCCTTCGGCTCTACCTTCCTCTCCGCCCCCCCAGACCTCCACCCCGCCCGGCTCGAACGCTCGCTGGAGGAAGAACCAAGGTCAGTCCTTCAACGGCCGTATTCTATGGAAACACACCAGGGGGCGCTACAGCTGTGTCCAGTGTGGCCACGCCACCCCAAACAGGAAGGAGATGACCGCCCACATCAAGGGCCAACACAAGAGCCCTGCTGCCAAGCCTGATGACCGTGTGCCCTCTTCACAGACCAAAGGGTCTTCAGAGACAGAGGCTAGCACCTACACCTGTCTCTGACTCGCCGGCCACATGGGAGGAAACGGTTAAATAATATGGTGTTTAGTGGAACTAGTTTCATCTCTTTATTTTCCTGTGAAAGTGATTAATTTCAATAAACATAATTAACTTGA
>TU2444668
GTCGTAagtaaaatactgccccctagtcacaacaggtttgAAGGTCGTAAGGAGTctctttctgaccacttctaccatgGGTAAATATGTAAAGAACGTTTTGTTCAAACGTTGCTTGGAATTCACATCCGTGTTAGTTCATGTTGACTTGTAGTCCCTattttagcctggtcccagatctgtttgtgctatagTCAACTGCAACGACCATAGGAGTTGGGGGCTACACGGATctataaacagatctgggaccaccaGGCTAGTCCTGTTGGAGATCCCTGGATGAAACAGACAGACGTGCTGATTGCAGTGATGAGTGAATTGTGTTTTATCGTGTTGCACTGTCCTGCCAGACGCTCCGGGGTCTCTAAGACACAGATggacctctcctcctccagccaaTCACAGGTTAACTAGAGATGGAGCGCAGGTCAGTCCTTCAACGGCCGTATTCTATGGAAACACACCAGGGGGCGCTACAGCTGTGTCCAGTGTGGCCACGCCACCCCAAACAGGAAGGAGATGACCGCCCACATCAAGGGCCAACACAAGAGCCCTGCTGCCAAGCCTGATGACCGTGTGCCCTCTTCACAGACCAAAGGGTCTTCAGAGACAGAGGCTAGCACCTACACCTGTCTCTGACTCGCCGGCCACATGGGAGGAAACGGTTAAATAATATGGTGTTTAGTGGAACTAGTTTCATCT

Function

symbol description
znf414 Predicted to enable metal ion binding activity. Orthologous to human ZNF414 (zinc finger protein 414).

NR:

description
zinc finger protein 414 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967116.1 False 1381 mRNA 0.56 7 41587299 41626814
XM_036967117.1 False 1459 mRNA 0.56 8 41587299 41626815
XM_036967118.1 False 1389 mRNA 0.55 7 41587299 41626818
XM_036967120.1 False 1368 mRNA 0.56 7 41587299 41626840
TU2444668 True 705 lncRNA 0.50 3 41587349 41592904

Neighbor

gene id symbol gene type direction distance location
si:ch211-106k21.5 LOC106596230 coding downstream 18554 41551990 ~ 41568745 (-)
LOC110509161 rs8 coding downstream 51102 41532971 ~ 41536197 (-)
LOC118944899 NA coding downstream 52739 41534492 ~ 41534560 (-)
LOC118944905 NA coding downstream 54554 41532614 ~ 41532745 (-)
LOC110509184 LOC103370426 coding downstream 195613 41277001 ~ 41391686 (-)
LOC110509166 LOC106596257 coding upstream 3742 41630582 ~ 41641166 (-)
LOC110508267 LOC106596213 coding upstream 279942 41906782 ~ 42137364 (-)
cfap410 cunh21orf2 coding upstream 733907 42360747 ~ 42368140 (-)
LOC118944818 NA coding upstream 743025 42369865 ~ 42370480 (-)
LOC110509173 NA coding upstream 773675 42400515 ~ 42410701 (-)
G2137579 NA non-coding downstream 12288 41574724 ~ 41575011 (-)
G2137578 NA non-coding downstream 13686 41573400 ~ 41573613 (-)
G2137576 NA non-coding downstream 17306 41569744 ~ 41569993 (-)
G2137540 NA non-coding downstream 80707 41505516 ~ 41506592 (-)
G2137507 NA non-coding downstream 133673 41453115 ~ 41453626 (-)
G2137590 NA non-coding upstream 2378 41629218 ~ 41629553 (-)
G2137620 NA non-coding upstream 69743 41696583 ~ 41697476 (-)
G2137622 NA non-coding upstream 73439 41700279 ~ 41700555 (-)
G2137625 NA non-coding upstream 77108 41703948 ~ 41704215 (-)
G2137419 NA other downstream 326028 41260800 ~ 41261271 (-)
G2137111 NA other downstream 1111598 40472088 ~ 40475701 (-)
G2137086 NA other downstream 1171759 40415303 ~ 40415540 (-)
G2136243 NA other downstream 1465400 40051639 ~ 40121899 (-)
LOC110508256 LOC106596607 other downstream 1590253 39973367 ~ 40103148 (-)
G2137555 NA other upstream 104874 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 183955 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 594082 42220922 ~ 42226965 (-)
G2138294 LOC106594920 other upstream 722376 42349216 ~ 42351452 (-)

Expression


Co-expression Network