LOC110509173


Basic Information

Item Value
gene id LOC110509173
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 42400515 ~ 42410701 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966738.1
GCTAAGGTATGACTTTACGCTGGAGTTTCCTCGCCCTCTCATGCCTAATATGGTGCTGGTGGGAGGGATCAACTGCCATGTCAGGAACCCTCTGCCACAGgagctggAGCAGTGGGTGTCAGGGGAACATGGCTTCATGGTGTTCTCTCTGGGCTCCATGGTGGCGTCTCTACCAGAAGACATCACTCACATCTTCCTACAGGCCTTCACCCTCATACCACAGAAGgtcctgTGGCGGTACTCTGGGCCTGTTCCTGGCAACGTTCCAGACAACGTGAAGATGATGAAGTGGATCCCTCAGAATGATCTGCTGGCTCACCATGGTGCACGGGCCTTCCTGACCCACAGCGGGACCCATGGTCTGTACGAGGGGGTGTGTCACGCCGTTCCCATGGTGATGCTGCCGTTGTTTGGCGACCAACCTGACAACGCTCAGCGATTGGCCAGTAAGGGAGTGGGCGTGGTTCTGGATATTAACCATATCACAGTGGAAACACTGCTACAGGCGCTGGACGAGGTTGTCAACAACCCCAGGTATAAGTCCAGTGTGCTGAAGCTCTCAGCCATTCACAAGGACCAACCAGTGGACCCCCTGGAGCTCTCTGCCTATTGGACAGAGTTTGTGATGCGCCACAAAGGGGCAGGCCACCTGAGAGCCGCCGCCCACGACCTCAATTGGTTCCAGTACCACAGCTTGGATGTGATTGGCCTGTTGATCGTCGCGGCGACGGCCGTTGTCATGATGACGTTAAAGTGCTTATCGCTGTGCGTGCGGAGGTTCACAACCAGGAAGATTAAGGAGGACTGACCAGTAGGGGCGGAGCCTAGAGGCAACAACAGATATCCACATTTATTTTAAATTTCCTAAAATGTTGTGTATTCAAATTGTGTATATCAACTTTTCCTAATAAACACCTGGAGGACGGACAGCCGTCCCCCTTGTTCTGTCCCACCACCAGCACACCTGGGTCTCCTTCAGTAGAGAGGCAACTGAGTGAAATGGCAACATCTCCATCTGAGGATAAAGGAACCAACCAAGAGGGAATCAGAAGCAAAGCAAAAAAGGACTCTACACTAATGAACTAATGAATACACCACAGATGTCTTCAGGACATAAAGATGGTGGTGTGTTTTTCTGTTTCAGTGTCGGGGAGAGTAATCCTAACCACGCCAATACAACTGTTCAGTGGATTAAAACCACACAAAAGTTTATTATGCATTCATTAGAATTACAGTCTGATCTGGTCCACTGTTGACGACAAATCTAATCCACTGTTATGTTCCACAGCTAAATAAAACCAAACAGGTACaggttta
>XM_036966736.1
cagaggaatTCAGAACAATCCAGTCCAAGAGAGATTAGGAAGCAGAgtaaatgagagagggagaaagacaaagGATATTTAATAAGGAGACACATGACAAGAACACAAGAAGACAGTCAAGAAAGGTTCTCATTTATCTTGtagtgacgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagatatgggggtaACAGCAGTTGTGGGTATGTGCCTGTTGTGGGTATGTGCCTCAGCCCTGGGGCAGAGTGGTGGTAGGATAGAGACTAGTGATAGTCGTGGTGGTAGTATAGagactagtggtggtagtatagaGACTGGTGGTAGTATAGAGACTAGTGGTGGTATAGAGACTAGTGGTGGTAGTGTAGAGACTGGTGGTAGTATAGAGTCTAGTGGTGGTAGTGTAGAGACTGGTGGTAGTATAGagactagtggtggtagtatagaGACTGGTGGTAGTATAGAGACTGGTGGTGGTAGTATAGagaatggtggtggtagtatagagactagtggtggtagtatagaGACTAGGGGTGGTAGTATAGAGACTAGGGGTGGTAGTATAGagactagtggtggtagtatagaGAATGGTTCACCTGGTAGAGCAGACCATTTAACTAGTGATACTAGTGGAACTAGTGATGACACTAGTAGCCCTGAGATTGTAATTGGTCAAACCGTTGATAGTGGTAATGATGGAACTGGCGTCGGTGGTCCGACTGGTTCCGTGGGCCGTCTGCTGGTAATACCGATGGACGGAAGCCACTGGGTGGGGGTTAAGGCCATCGCCGAGGAGATGGGTCGCCGTGGACACCAGGTTACCGTGGTGATCCCCGAGGTGAGCATGCGTCTGGGCCCCAGCAGCAACTGCAGGACTGTGTCATATCCTGTCCCATACGGCCAGGAGACAGTGGACATGCTGATGGACAAGCATGCAGATAACCTGCGTGCTGCCACACTGCCCCTAGTGGAGCGGATGACTCAACGCATGGCTAATATCCAGAATGTCAGCTCCTTCATACTGACTACTGCTGAGAGTCTGCTGTTCAACACCACACTAATCACATCTCTGGAACAGCAGggttttGATGCAGTGTTGACCGACCCGCTGGTCCCTACAGGCAGTCTGATAGCCAGGCGTCTGGGCGTTCCGTCTGTGTGTCTGCTCAGAGGGATACCCTGTGGTCTGGACCTGGCCTCAGCCGCCTGCCCTTCTCCTCCATCTTACGTTCCACGCTTCTTCACCAAATACACACATAGCATGAGCTTTCCACAAAGGGTGGGCAATGTACTGGTGAGTCTGGTGGAGCCGTTGCTATGCCGACTGCTGTACTTGCGCTTCGACCAGCTGGCCAATCGCTTCCTGGGAGAGGATGTGGGTGTGGCCGAGGTACTGGCAGACACCGCCCTCTGGTTGCTAAGGTATGACTTTACGCTGGAGTTTCCTCGCCCTCTCATGCCTAATATGGTGCTGGTGGGAGGGATCAACTGCCATGTCAGGAACCCTCTGCCACAGgagctggAGCAGTGGGTGTCAGGGGAACATGGCTTCATGGTGTTCTCTCTGGGCTCCATGGTGGCGTCTCTACCAGAAGACATCACTCACATCTTCCTACAGGCCTTCACCCTCATACCACAGAAGgtcctgTGGCGGTACTCTGGGCCTGTTCCTGGCAACGTTCCAGACAACGTGAAGATGATGAAGTGGATCCCTCAGAATGATCTGCTGGCTCACCATGGTGCACGGGCCTTCCTGACCCACAGCGGGACCCATGGTCTGTACGAGGGGGTGTGTCACGCCGTTCCCATGGTGATGCTGCCGTTGTTTGGCGACCAACCTGACAACGCTCAGCGATTGGCCAGTAAGGGAGTGGGCGTGGTTCTGGATATTAACCATATCACAGTGGAAACACTGCTACAGGCGCTGGACGAGGTTGTCAACAACCCCAGGTATAAGTCCAGTGTGCTGAAGCTCTCAGCCATTCACAAGGACCAACCAGTGGACCCCCTGGAGCTCTCTGCCTATTGGACAGAGTTTGTGATGCGCCACAAAGGGGCAGGCCACCTGAGAGCCGCCGCCCACGACCTCAATTGGTTCCAGTACCACAGCTTGGATGTGATTGGCCTGTTGATCGTCGCGGCGACGGCCGTTGTCATGATGACGTTAAAGTGCTTATCGCTGTGCGTGCGGAGGTTCACAACCAGGAAGATTAAGGAGGACTGACCAGTAGGGGCGGAGCCTAGAGGCAACAACAGATATCCACATTTATTTTAAATTTCCTAAAATGTTGTGTATTCAAATTGTGTATATCAACTTTTCCTAATAAACACCTGGAGGACGGACAGCCGTCCCCCTTGTTCTGTCCCACCACCAGCACACCTGGGTCTCCTTCAGTAGAGAGGCAACTGAGTGAAATGGCAACATCTCCATCTGAGGATAAAGGAACCAACCAAGAGGGAATCAGAAGCAAAGCAAAAAAGGACTCTACACTAATGAACTAATGAATACACCACAGATGTCTTCAGGACATAAAGATGGTGGTGTGTTTTTCTGTTTCAGTGTCGGGGAGAGTAATCCTAACCACGCCAATACAACTGTTCAGTGGATTAAAACCACACAAAAGTTTATTATGCATTCATTAGAATTACAGTCTGATCTGGTCCACTGTTGACGACAAATCTAATCCACTGTTATGTTCCACAGCTAAATAAAACCAAACAGGTACaggttta
>XM_036966737.1
cagaggaatTCAGAACAATCCAGTCCAAGAGAGATTAGGAAGCAGAgtaaatgagagagggagaaagacaaagGATATTTAATAAGGAGACACATGACAAGAACACAAGAAGACAGTCAAGAAAGGTTCTCATTTATCTTGtagtgacgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagatatgggggtaACAGCAGTTGTGGGTATGTGCCTGTTGTGGGTATGTGCCTCAGCCCTGGGGCAGAGTGGTGGTAGGATAGAGACTAGTGATAGTCGTGGTGGTAGTATAGagactagtggtggtagtatagaGACTGGTGGTAGTATAGAGACTAGTGGTGGTATAGAGACTAGTGGTGGTAGTGTAGAGACTGGTGGTAGTATAGAGTCTAGTGGTGGTAGTGTAGAGACTGGTGGTAGTATAGagactagtggtggtagtatagaGACTGGTGGTAGTATAGAGACTGGTGGTGGTAGTATAGagaatggtggtggtagtatagagactagtggtggtagtatagaGACTAGGGGTGGTAGTATAGAGACTAGGGGTGGTAGTATAGagactagtggtggtagtatagaGAATGGTTCACCTGGTAGAGCAGACCATTTAACTAGTGATACTAGTGGAACTAGTGATGACACTAGTAGCCCTGAGATTGTAATTGGTCAAACCGTTGATAGTGGTAATGATGGAACTGGCGTCGGTGGTCCGACTGGTTCCGTGGGCCGTCTGCTGGTAATACCGATGGACGGAAGCCACTGGGTGGGGGTTAAGGCCATCGCCGAGGAGATGGGTCGCCGTGGACACCAGGTTACCGTGGTGATCCCCGAGggttttGATGCAGTGTTGACCGACCCGCTGGTCCCTACAGGCAGTCTGATAGCCAGGCGTCTGGGCGTTCCGTCTGTGTGTCTGCTCAGAGGGATACCCTGTGGTCTGGACCTGGCCTCAGCCGCCTGCCCTTCTCCTCCATCTTACGTTCCACGCTTCTTCACCAAATACACACATAGCATGAGCTTTCCACAAAGGGTGGGCAATGTACTGGTGAGTCTGGTGGAGCCGTTGCTATGCCGACTGCTGTACTTGCGCTTCGACCAGCTGGCCAATCGCTTCCTGGGAGAGGATGTGGGTGTGGCCGAGGTACTGGCAGACACCGCCCTCTGGTTGCTAAGGTATGACTTTACGCTGGAGTTTCCTCGCCCTCTCATGCCTAATATGGTGCTGGTGGGAGGGATCAACTGCCATGTCAGGAACCCTCTGCCACAGgagctggAGCAGTGGGTGTCAGGGGAACATGGCTTCATGGTGTTCTCTCTGGGCTCCATGGTGGCGTCTCTACCAGAAGACATCACTCACATCTTCCTACAGGCCTTCACCCTCATACCACAGAAGgtcctgTGGCGGTACTCTGGGCCTGTTCCTGGCAACGTTCCAGACAACGTGAAGATGATGAAGTGGATCCCTCAGAATGATCTGCTGGCTCACCATGGTGCACGGGCCTTCCTGACCCACAGCGGGACCCATGGTCTGTACGAGGGGGTGTGTCACGCCGTTCCCATGGTGATGCTGCCGTTGTTTGGCGACCAACCTGACAACGCTCAGCGATTGGCCAGTAAGGGAGTGGGCGTGGTTCTGGATATTAACCATATCACAGTGGAAACACTGCTACAGGCGCTGGACGAGGTTGTCAACAACCCCAGGTATAAGTCCAGTGTGCTGAAGCTCTCAGCCATTCACAAGGACCAACCAGTGGACCCCCTGGAGCTCTCTGCCTATTGGACAGAGTTTGTGATGCGCCACAAAGGGGCAGGCCACCTGAGAGCCGCCGCCCACGACCTCAATTGGTTCCAGTACCACAGCTTGGATGTGATTGGCCTGTTGATCGTCGCGGCGACGGCCGTTGTCATGATGACGTTAAAGTGCTTATCGCTGTGCGTGCGGAGGTTCACAACCAGGAAGATTAAGGAGGACTGACCAGTAGGGGCGGAGCCTAGAGGCAACAACAGATATCCACATTTATTTTAAATTTCCTAAAATGTTGTGTATTCAAATTGTGTATATCAACTTTTCCTAATAAACACCTGGAGGACGGACAGCCGTCCCCCTTGTTCTGTCCCACCACCAGCACACCTGGGTCTCCTTCAGTAGAGAGGCAACTGAGTGAAATGGCAACATCTCCATCTGAGGATAAAGGAACCAACCAAGAGGGAATCAGAAGCAAAGCAAAAAAGGACTCTACACTAATGAACTAATGAATACACCACAGATGTCTTCAGGACATAAAGATGGTGGTGTGTTTTTCTGTTTCAGTGTCGGGGAGAGTAATCCTAACCACGCCAATACAACTGTTCAGTGGATTAAAACCACACAAAAGTTTATTATGCATTCATTAGAATTACAGTCTGATCTGGTCCACTGTTGACGACAAATCTAATCCACTGTTATGTTCCACAGCTAAATAAAACCAAACAGGTACaggttta

Function

NR:

description
UDP-glucuronosyltransferase 1-1-like

GO: NA

KEGG:

id description
K00699 UGT; glucuronosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966738.1 False 1317 mRNA 0.50 6 42400515 42405657
XM_036966736.1 False 2791 mRNA 0.51 8 42400515 42410701
XM_036966737.1 True 2548 mRNA 0.50 8 42400515 42410701

Neighbor

gene id symbol gene type direction distance location
LOC118944818 NA coding downstream 30035 42369865 ~ 42370480 (-)
cfap410 cunh21orf2 coding downstream 32375 42360747 ~ 42368140 (-)
LOC110508267 LOC106596213 coding downstream 263151 41906782 ~ 42137364 (-)
LOC110509166 LOC106596257 coding downstream 759349 41630582 ~ 41641166 (-)
znf414 znf414 coding downstream 773675 41587299 ~ 41626840 (-)
LOC110509174 them6 coding upstream 61190 42471891 ~ 42493837 (-)
them6 them6 coding upstream 87582 42498283 ~ 42508205 (-)
LOC110508271 NA coding upstream 219444 42625607 ~ 42703120 (-)
LOC110509177 LOC106597278 coding upstream 322942 42733643 ~ 42772837 (-)
LOC110508296 pde1c coding upstream 466795 42877496 ~ 42959408 (-)
G2138286 NA non-coding downstream 15092 42368244 ~ 42385423 (-)
G2138287 LOC106596129 non-coding downstream 59444 42339661 ~ 42341071 (-)
G2138313 NA non-coding downstream 75749 42324317 ~ 42324766 (-)
G2137877 NA non-coding downstream 112186 42288008 ~ 42288329 (-)
G2137874 NA non-coding downstream 113909 42286403 ~ 42286606 (-)
G2138348 NA non-coding upstream 20588 42431289 ~ 42431644 (-)
G2138358 NA non-coding upstream 49728 42460429 ~ 42461528 (-)
G2138366 NA non-coding upstream 64769 42475470 ~ 42475859 (-)
G2138367 NA non-coding upstream 65742 42476443 ~ 42477643 (-)
G2138386 NA non-coding upstream 111613 42522314 ~ 42522784 (-)
G2138294 LOC106594920 other downstream 49063 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 173550 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 586314 41810795 ~ 41814201 (-)
G2137555 NA other downstream 664126 41731714 ~ 41736389 (-)
emilin2a LOC106595984 other upstream 964046 43343531 ~ 43398034 (-)

Expression


Co-expression Network