LOC110509174 (them6)


Basic Information

Item Value
gene id LOC110509174
gene name them6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 42471891 ~ 42493837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965943.1
AAAGCTCCAGCCATCCTTGTCTTTTCACCAGTTAGCTTTCATTGTGTTAGACAAGGCCAGTGGGCATCCTTATGTTTTCACCAGTTAGCTTTCATTGTGTTAGCCAAGGCCAGTGGGCATCCTTATGTTTTCACCAGTTAGCGTTCATTGTGTTAGTTGTAACTTTTTTTATACCAATAATGAAAATGTTGACACCGTTGTGTTGAGAATAGTGGGCTGTAGAGAAGTGGTCTACTGTCTCAGCTAAAGTGGGGTGGGAGATAATCAGTAAGGTTTCTCTTATGTGTATTTTTAGAGGGGAACGGTGTCGTACATAACCATAAGCAGTACTTATAGCTGCACTGAATGCATTATGGTGCCATAGGCTATCCAAATCACTGTAGGGGAGGACTTGGTGGCCTGTATATTCTTTGAATTAGTTATACACGTTGCAATGTTTTGAAATGCGGGCTTTTATTTTGAACATTTCCTCATTACCATACCACCCGGAAGTCATCGTTTGTGCTGCTGGCAGAATACCGGCTCGTCATTTACGGCTTCTTCCACTTCGCAGCACATCTCCAGATAAACGCTagaGATGTTGCTGTGTGCTCTGGTGGGTCTGCTGCTGCTGTTCTCCTGTCTGGATGTGTGGTACTTCCTgcggggggtggtggtggtggtgcaggCCTGGTTCCAACCCCCGGTCTGGGATGTCCTGGCAGAACAGAGTGTTGCTGGGAGGGTCCTACCTCATGACCTGGACTATATGGGTCACATGAATAACGCCAGATACCTCCGGGAGTGTGACTTCGCCAGGTTCCACCATTACATGCGGAACGGGATCTTTAAGGCCCTACGGACCCTGAAGGCCACCATGGTGGTGGGGGCCTCCACTATTCGCTACCGACGCTCGCTGGCCTTCGGGGAAGCATTTGACTTGCGCACTCGCATCGTGGCATGGGACGACAAGTCATTCTACGTGGAGCAGCGGTTTGTCTCCCAGGGCGACGGGTTCATCTCCGCGGTGATGCTATGCAGACAGAATGTTCTCCGTAGCAACCCTGAGAGCATCCTACAGCTGCTCTGCAAGAGGAAGgtGGAGTGTCCCGACTACCCTGAGGATCTGCAGCACTGGATCAGCTTCATCTCAGCCAGCAGCCAGGCCCTGAGAGCCCAGAGTGGACTAGAGGACAAGACTGGAGCGCAGGAAGACAAAGACAAGTGATACACACATTCCTTGAGGAGCCCTAACATTACACATTGTTGTAGCCCGGCcccaagcacacctgattcaacgaATCTGCTTATAATTCAGCtgttgattagttgaatcaggtgaggGCCTAGAACTGACATGACTGACAGCTCCCTCAGTATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAAATAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACAGCTCCCTCAGAATACAGGAACTAAACTGACATGACTGACACCTCCCTCCGAATACAGGaacttattcattatgattttaaaatacaaaactgatcctagatcagtacagCTACTACAGACCAAGTGGCTTTAACCTtgtactgcagtgggctaaatcagggtcacagagtGATTCTGGGTAGTCTTAAACAGATCTACATTGAAACAAAAGAATAcatctcacacacatggttatgggcttaaacaaagacacctgtaccatgtcagatatggaGCTGAAATGTATAACATGtttagtttgcatcccaatattacactttatatacatcacagaagactgaaatataacaaaactgcttgacatagaaacaccggatttctacattaaaaatatatatatatgtttcttAATTATGAAAAACAtttcacccatgaggccactagagagCACTTTGGTCATTGGCCTGCAGGATAGAGGACCATCGTGTTGTTAAGGGATTCATCCTAACCTAAGATGCAAAACCTTTTCCCATTGACATGAAACTCTTACCATAATAGTTTTAGTTACGTGTGCATGTATCTCGAGATAGTCTCTTTCAATTATTCATTTCGACATCTGTGGGATTCACCAGAATTACCTAAGTAGCTCGAAGGACCAATCATAAATGTCTGTCGGAGACTGACGGGTCGAGTGGCGAATGACGGAGCCCCTCCCATCATACTAAAGAGCCAGTCACCTGCCCTCTGATCATTCTCACCTCTCTTCCACACAGAGGAGTTCTACTCAGCTCTCCTCAGCACCACTAGATCTGTTTTCCTGTTCACAGGTTTAACGGTTACACAGCCGAGCGATGGGTTATTCGTCTTTTGTGTTGGGTGACCTtgggcaaggcacttaaccctaattgctccctgtaagtcgctctggataagagtttttgctaaattactaaaatgcaGAATGAACGTTTTCGCTTCACTGCTTTTTCTTCATTCGTCTCCTGTTGTAGCTAGCGTAAAACAGCTAGCGTAAAACAGCTAGCTAAGGAGACTTGGCTAGCTTAGCTGCAAGGCCAGCTCCCCTACCGACTAGCTCTTCTACCTGGAAGTTTGAACTCTCGTTTAGTTCAACCCACTACCGATGTTGACCAGACCGACCATCCTAGCGTCACTGCTTATCGATCGAGAAGCACACTGTTGTTCATCACAAGACCAACATAACGTTGGCTAGCCGTTGGCTAGCCATGCTACTAGCCCTTGTGACGAACGCTAGCTGCGCTCACATTGTTAAAGGGATTGGCTTCTCCGGCCAGCACTGTGCTAACTCACTAGCCTACCACACTCGCTAGCCTACCACACTCGCTAGCCTACCTCGCTAGCCTACCACACTCGCTAGCCTACCACACTCGCTAGCCTACCACGCTAGCCTACCACGCTAGCCTACCACGCTAGCCTACCATCGTTTTACTTTGTTCTCGAATTAGCCTTTTTTTGGAGCCATGGAACATGCTAACTCGGCCCAAGATTTACCGAACAAGGCCTGTGCCCATGCTGGGCTACCATATATTTTATACGGGATGACTTTATTCCGCATAAAAGTAACGTTGTAGCCCCTTGGTGGCAAGGCAAGCTGTGGATAGCGGAGATCATTCACCCGCTGTACAACAAGCCTGGGCAACTCCTGTTACGCAGAGATCAGCTGACCAAAGCGAACTGAGAGACTGTCCCTCACCCGGAAGCCATGGCCCTCTGGCCCTTGAGAGGTTAAATGTGGACTATTGAGTCTATCCAGAGTGCTAGGGCTCATTCTACACGCTCACTGTATGGAAACaagtggtgttttt

Function

symbol description
them6 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human THEM6 (thioesterase superfamily member 6).

NR:

description
protein THEM6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965943.1 True 4230 mRNA 0.47 4 42471891 42493837
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110509173 NA coding downstream 61190 42400515 ~ 42410701 (-)
LOC118944818 NA coding downstream 101411 42369865 ~ 42370480 (-)
cfap410 cunh21orf2 coding downstream 103751 42360747 ~ 42368140 (-)
LOC110508267 LOC106596213 coding downstream 334527 41906782 ~ 42137364 (-)
LOC110509166 LOC106596257 coding downstream 830725 41630582 ~ 41641166 (-)
them6 them6 coding upstream 4446 42498283 ~ 42508205 (-)
LOC110508271 NA coding upstream 136308 42625607 ~ 42703120 (-)
LOC110509177 LOC106597278 coding upstream 239806 42733643 ~ 42772837 (-)
LOC110508296 pde1c coding upstream 383659 42877496 ~ 42959408 (-)
LOC110509179 LOC105010334 coding upstream 479518 42973355 ~ 42987359 (-)
G2138358 NA non-coding downstream 10363 42460429 ~ 42461528 (-)
G2138348 NA non-coding downstream 40247 42431289 ~ 42431644 (-)
G2138286 NA non-coding downstream 86468 42368244 ~ 42385423 (-)
G2138287 LOC106596129 non-coding downstream 130820 42339661 ~ 42341071 (-)
G2138313 NA non-coding downstream 147125 42324317 ~ 42324766 (-)
G2138386 NA non-coding upstream 28477 42522314 ~ 42522784 (-)
G2138414 NA non-coding upstream 105844 42599681 ~ 42600138 (-)
G2138420 NA non-coding upstream 117220 42611057 ~ 42615032 (-)
G2138424 NA non-coding upstream 129453 42623290 ~ 42625470 (-)
G2138294 LOC106594920 other downstream 120439 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 244926 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 657690 41810795 ~ 41814201 (-)
G2137555 NA other downstream 735502 41731714 ~ 41736389 (-)
emilin2a LOC106595984 other upstream 880910 43343531 ~ 43398034 (-)

Expression

LOC110509174(them6) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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LOC110509174(them6) Expression in each Bioproject

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LOC110509174(them6) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network