emilin2a (LOC106595984)


Basic Information

Item Value
gene id emilin2a
gene name LOC106595984
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 43343531 ~ 43398034 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036966530.1
aaaGGAGTCTAACAGCTACGTCGTTCCAGTGGAGTCAACAGCGACCCGCAAAGAGATCTCCAAAATTTAGTCAGGTTCTGCTCAGTTACCGGGCGGCCGCACATAGAATATCAACTTTTAAAAGATACATATATCTGAACTTTTCTTGTCCATGTTCCGTAGTAGTTAATTTAATCTGTTGTCTACGATGAAGTGGGGAGCAGCTGATTTGGGGGTAACATGGACATTGTTCTCTCTGTTCTTCAACTTTTCTGTCACCAACGGACAAAATCCGCCGAACTACAACCTTTTCCAAGGAGCTGCGTACCAGGGCGCGAGACACCGACAGTCACAGAGGAATAGgAATTGGTGTGCATATGTGGTCCATAAGAACGTGAGCTGTACCGTCCAGGGGAATGTGGAGAGCTTTGTGGAGCCTGAGGTGGCACCGTGCCCAAACCATGACCCAGACTGTGAGCAACAAGTGATGTATCGGACGCGGTTCCGGCCGGCCTATAAGATCGCCTATAAGACGGTGACAGACCTGGAGTGGAGGTGTTGCCCTAGTTACCAGGGACCAGACTGCTCTGAGCTGAAGGCTGctcctaacagacagacagtaccagCCGGGTCACAGCCACCCCAAACCCAGTACCCAAACAGACAGATCGTACCAGCAGGGTCACAACCTCACCAAAACCAGTAccctaacagacagacagtgccAGCAGGGTCACAGCCTCACCAGAACCATAACTCAGAGGAAGCACCACACTACCCCCAGACCAGATCCATCCCTGGACAGACCAGACACCCACAGAggccagagaggagggagacgggAGTGTACGAGGGGAGGCATGGAGGAGCAGAAAAAGACAGGGTGCGTCTCCTGGAGGATGAGGTGCAGCGCCTCTCCCAAACAGTGGGGGCGCTGCAGGCTGCGATAACTGGGCTGAGCTCTACTCTGAGATCTGACCTGCAGGAGGACACCTCCAAGATGCTGGTCACCCTGCTCAACAACCTCCGCGCTGTGACCCCTGACAGTGTCCACGCCCCCGACATAGAGCAGGCCGCAGTACCACCAGACAACCACCAGGGGTCAGTGATCGACGGGCACCAGGCCACCAGGGGGCCAGTCCAGGGGGACAGGGGGCTAGAAAAGGTCCTGGCCAGGTTGGATGATGTCAACACCTCTCTGAAGAGTAAAGAGGAGGCTCTGGAGGAGCTGAGAGGTACCGTGACCTCACACAGCGGTCATATCCGCCTGCTGCTTGATGCCTCTCAGACACAGCaagaccctgaccctaaccctgttggGGGTGGAGCCCCTGCTGACCTGGAGGAGCTACTAGAGAAATACATGGACAGGCAGCTGGGCTTCCTGAGGAAGAACATGGAGGACAGCATGGAGAGAacgatagaggagaggatagggaagGAGGTGGAGAAGCTGCAGAAATTCTGTGATGGAAGGATCCAGCTGATGgagaggaggtgtgaggaggAGCGGGAGAGAGGAATGCTCAGTCTGACTGAGATGGTGGACAAGGAGGAGCAGCTAAAGCAGGAGATCAGGGAGTTGAGACTGGACATCACTGCCTCCGACCAGCCTGGCCGGTCACTCAGACAGACTGACCCCAAACCTAatgttagacagactgacactaaACCTAATGTTAGACAGACTGATTCCAAGCCCAGCCTTAGGCAAACTGCCCCTGCCAGACAGACCGACCTGGCTAGACAGGATAACCAGCCACCAGGTATCCTACCAGCTGTCCAGCGTGGTGACCTATCTGACCTGTGGAGGGAGCTGGAGCGTGTGGCGGAGGCCCATCGCATCCTGAATGCCCGCATGGACAATGAGCTGCAGTACCTGTCCTCTCCACGGGGGGAGCTAGAGGGAAAGGGGTTAGAGCTagagggggaggggttaggactagagggagaggtggggtcTCGGCTGGAGGAGTTAGAGGCGCGTCTGAATGTGACAGAGCAGAACGCGGAGGTCCACTGTTTCTACGTGGAGGAGAAGCTGACCCGGGCACTAGCCGAGCAAGGGGCGGAGCTACGACAGCTGCTGGAGGAACGAGTAAACGTACTGGAAGACCAGTTTACTACCATGCTGGTCGAGATGAACAACGAGTCATATCctgttggaggaggagggagcGTGGACCTTCAGGCTGAGTTGAACAACAACAAGTTTCTTCTGCAGGGTCTGAATGACAAGGTGACCGCTGTGGCTGAGCTCTGTGCTCCCGGCTGTGGTGGAGGACCTAACACCGGAGGGTTTCCCAACACCAACCCTGGGGCTTCCTCCCACCCTGTAGTTctggacagtgtggtgaaggacCTGAAGCTCTGTTGTAACGACCTGGAAATCCTCCACACGGATGTGACGTCCAACTCTGACAAACTGAGAGAGCTGGAGGAGATTATAGACAGGCAAATGGTGGGGCAGAAGCGGAGTGTTAAGGAGGTGGAGGACCTCCAGAGGGGGATGGTGATCCTGCAGGACAACGTAGGGGGTCTGGGGGGGGCAGTGACAGGGCTGGGGGACTCTCTGAGCAGGTACACCCAGGACCTCACCAGGATTAACACCACCTACAACACCTGCTGCCAGGTTGGGTCAGGGGCCAGGCCAGGGGAAGGGTTAGGTGGGTTTGGTGCCACTACTATCGGTCCAGGCAGGATCCAGAGTGCGTCTGAGGTAACGGTccccagaggagaggtggagggaagcaGCAGCAGCCAGGTGGAGGAGCTGAGAACCAAACTGGACAGCCTCACTaaccagGTGCAGACAGAACTTCAGCGTTGCTCTGGTGTGTCTGGGGTGGAGGGGCGTGTCCAGCGCCTGGAGAAAGTGTGTGTTCAGCTGGACGGGGTGTCGGCCAGGGTGCGGGGAGTGAAGGAGGGTTTGGAGAAGCACGTCGCTGGGCTGTGGCACCACGTCAGCCGTGTCAACACCATGCTGGAAAGACAGGCTGCTGACATCACCACCCTAGAGACCTCCCTAAAGACACTACAGACCAGGAGCACTGACACCAACGCCAGGGAGACAGatgaaGCTGTGAGACCTGGTTCTGTCCCAGATCAGACCAGAACCAGGGTTAACCAGATCCACATTCCCCACAGGACCCCCCTTGACTCGTCCCCCCAGACCCCCAGGCAACCCTACAAccccagacagccagccagtccACACCAGCCTACCAACCCTCTACAGCCCAACACCCACCGCCATCCGAACCAACCAACTCTGTACCTGGTGCCACATAAGCCTAATCAGCCAGGCCAGCCCACTGTCATCCTCGTACCCCATCCTAACCAACCATCCAACCCTAACCAACCCTTCTTAACGATGGTACCCCGCCAGCCCAGCCCCCCCTCTAACCCTCCCAGTCAGCCGCGTCGGGTCCTGGAGGTGGGAGAGGCTGGTCCACCAGGCTACATGAGGAGGGTAACAGTCAGGAGAGGATCAGATGACTCATCCTCCACACCTGTTAAAGGATTCGCTGGAGCACCAGGATACAACCCTCCCGAAAAGCCATTCTCCTTCAGCAAACATGAGACGATCCCAGTAGCTGCCAAGGTCCCCTGGAACCCAGCGTCACAGACCCCACTAGTCACACCAGTGTCTTCAGACAGTAGTTTCCTGGCAgaccccttctccttctctgctGGCCTGACCACTCAGTTCTCTGGGGAGTTTGGAACCATCCTCTTCAACAAGGTGCTGGTCAACGATGGAGGACATTACAACTCTCACAcaggtatcTTCACGATACCGATGGAAGGGCGTTACCTGATCTCAGGAGTTCTGATGGCTCGGCAGGGGAAGGGACTGGAGGCTGTTTTGTCTGTCTCCAACCGTAGTGTCCATAGGCTGATGAGCTCCGCGTCTGGAGCAGGGACAGTGGCCCAGGACAGTTGTCCCTGTGGAGGCTCTATCTCGTTCAGCCTGATCCTGTCTCTGAGGCAAGGGGACCACGTAGCTCTGGTCCGGACCGCAGGGCAGCTGGCCACCACAGAGTCCAGAGACATCCTATCAACATTCAGCGCCATCTTCCTCTATGCCCCGCAGCCAATCACCAGATAGTTACCACTGGGCCAACCAATCACACAGCAAGGACTTGGTCATGTACATTCCACAACCAATCAGAAAGCAGGAATACATTTAAACAGACACCAGAAATCCAATCAGCTGCAACCCTGCAGTTGTTCAGAATAATGATTTGTATCATAGATATTCACCATGTAAAAAGTAATTCTGCAACCCTGCAGTTGTTCAGAATAATGATTTGTATCATAGATATAGATATTCACCATGTAAAAAGTAATTCTATGCTCGCCTTTTTACTGAACAATTATGCCaaagatataaaaaaatattaagtGTTAATTCATGTATTTGACAATTTggatatctgttttttttctaccttttgttttaaaacattttcctaAATTAACATTTATACAATTATATATGTACTTTTTTTTCTTTAAATAAATGTCAGAGGGAAGAGACAACCATATAGTTTAATCAGTATTCCATACCACATCCTGTTTAGATTAATCTGTTTTACAGGTTATTCCATACCAAAACACTGTTACCATTAGTAAAACAGTAGGGTTGATTCATTCCTTCACGTATGTTGTCAATAAACCCATTTGAAGATTT
>TU2446193
AGTTAGAGGCGCGTCTGAATGTGACAGAGCAGAACGCGGAGGTCCACTGTTTCTACGTGGAGGAGAAGCTGACCCGGGCACTAGCCGAGCAAGGGGCGGAGCTACGACAGCTGCTGGAGGAACGAGTAAACGTACTGGAAGACCAGTTTACTACCATGCTGGTCGAGATGAACAACGAGTCATATCctgttggaggaggagggagcGTGGACCTTCAGGCTGAGTTGAACAACAACAAGTTTCTTCTGCAGGGTCTGAATGACAAGGTGACCGCTGTGGCTGAGCTCTGTGCTCCCGGCTGTGGTGGAGGACCTAACACCGGAGGGTTTCCCAACACCAACCCTGGGGCTTCCTCCCACCCTGTAGTTctggacagtgtggtgaaggacCTGAAGCTCTGTTGTAACGACCTGGAAATCCTCCACACGGATGTGACGTCCAACTCTGACAAACTGAGAGAGCTGGAGGAGATTATAGACAGGCAAATGGTGGGGCAGAAGCGGAGTGTTAAGGAGGTGGAGGACCTCCAGAGG

Function

NR:

description
EMILIN-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036966530.1 False 4675 mRNA 0.54 10 43343531 43398034
TU2446193 True 533 TUCP 0.55 2 43374747 43375558

Neighbor

gene id symbol gene type direction distance location
LOC118944838 LOC106596014 coding downstream 266071 43041222 ~ 43077460 (-)
LOC110509179 LOC105010334 coding downstream 356172 42973355 ~ 42987359 (-)
LOC110508296 pde1c coding downstream 384123 42877496 ~ 42959408 (-)
LOC110509177 LOC106597278 coding downstream 570694 42733643 ~ 42772837 (-)
LOC110508271 NA coding downstream 640411 42625607 ~ 42703120 (-)
G2138741 NA non-coding downstream 11258 43313416 ~ 43332273 (-)
G2138694 NA non-coding downstream 38642 43304471 ~ 43304889 (-)
G2138691 NA non-coding downstream 59533 43280414 ~ 43283998 (-)
G2138679 NA non-coding downstream 95659 43246749 ~ 43247872 (-)
G2138670 NA non-coding downstream 102243 43232568 ~ 43241288 (-)
G2138776 NA non-coding upstream 722 43398756 ~ 43398967 (-)
G2138781 NA non-coding upstream 9208 43407242 ~ 43407474 (-)
G2138859 NA non-coding upstream 46498 43444532 ~ 43448124 (-)
G2138871 NA non-coding upstream 68746 43466780 ~ 43469437 (-)
G2138883 NA non-coding upstream 89941 43487975 ~ 43488244 (-)
G2138294 LOC106594920 other downstream 992079 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 1116566 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1529330 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1607142 41731714 ~ 41736389 (-)
LOC110509166 LOC106596257 other downstream 1712148 41630582 ~ 41641166 (-)

Expression


Co-expression Network