G2093245


Basic Information

Item Value
gene id G2093245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 858962 ~ 912451 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2394507
gaaaatcacatagtaggattttttattaatttatttgcaaattatggtggaaaataagtatttggtcaataacaaaagtttatctcaatactttgttatatacactttgttggcaatgaccgaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctattgctgggcaacacggactttcaactccctccaaagattttctatggggttgagatctggagactggctaagccactccaggaccttgaaatgcttcttacgaagccactccttcgttgcccgggcagtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgctgatggaaggctttgttactttggtcccagctctctgcaggtcattcactaggtccccccatgtggttctgggatttttgctcaccgttcttgtgatcattttgaccccacagggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattgtgttagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaattttgcttgtttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggattttttttctcattttgtctgtcatagttgaagtgtacctatcatgaaaattacaggcctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatactttttcgcCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2394507 True 1029 lncRNA 0.42 2 858962 912451
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508306 LOC106600515 coding downstream 275538 555687 ~ 583424 (-)
LOC110508302 LOC106587021 coding downstream 629370 181782 ~ 229592 (-)
LOC118944809 NA coding upstream 76334 988785 ~ 991348 (-)
phc3 phc3 coding upstream 93437 1005888 ~ 1029028 (-)
LOC110508204 LOC106600525 coding upstream 293324 1205775 ~ 1208298 (-)
LOC110508319 LOC106600498 coding upstream 435313 1347764 ~ 1353801 (-)
LOC110508320 NA coding upstream 480815 1393266 ~ 1394586 (-)
G2093235 NA non-coding downstream 15033 842279 ~ 843929 (-)
G2093142 NA non-coding downstream 152491 704034 ~ 706471 (-)
G2093023 NA non-coding downstream 340253 518427 ~ 518709 (-)
G2093021 NA non-coding downstream 342459 516165 ~ 516503 (-)
G2093310 lsm7 non-coding upstream 40480 952931 ~ 954323 (-)
G2093316 NA non-coding upstream 44614 957065 ~ 957363 (-)
G2093424 NA non-coding upstream 102930 1015381 ~ 1015763 (-)
G2093490 NA non-coding upstream 192951 1105402 ~ 1107594 (-)
G2093491 NA non-coding upstream 195751 1108202 ~ 1108464 (-)
G2092886 NA other downstream 524023 334529 ~ 334939 (-)
G2093433 NA other upstream 122977 1035428 ~ 1035674 (-)
G2093581 LOC106600502 other upstream 243583 1156034 ~ 1164637 (-)
LOC110508327 lig1 other upstream 791362 1703128 ~ 1742400 (-)
G2094433 LOC106600477 other upstream 994456 1906907 ~ 1907412 (-)
G2096163 NA other upstream 2396693 3309144 ~ 3309674 (-)

Expression

G2093245 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G2093245 Expression in each Bioproject

Bar chart with 21 bars.
G2093245 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network