Gene
RNA
| Item | Value |
|---|---|
| gene id | G2093257 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 871804 ~ 872206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2394519 | True | 380 | lncRNA | 0.43 | 2 | 871804 | 872206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508306 | LOC106600515 | coding | downstream | 288380 | 555687 ~ 583424 (-) |
| LOC110508302 | LOC106587021 | coding | downstream | 642212 | 181782 ~ 229592 (-) |
| LOC110508312 | sppl2b | coding | upstream | 25383 | 897589 ~ 947373 (-) |
| LOC118944809 | NA | coding | upstream | 116579 | 988785 ~ 991348 (-) |
| phc3 | phc3 | coding | upstream | 133682 | 1005888 ~ 1029028 (-) |
| LOC110508204 | LOC106600525 | coding | upstream | 333569 | 1205775 ~ 1208298 (-) |
| LOC110508319 | LOC106600498 | coding | upstream | 475558 | 1347764 ~ 1353801 (-) |
| G2093235 | NA | non-coding | downstream | 27875 | 842279 ~ 843929 (-) |
| G2093142 | NA | non-coding | downstream | 165333 | 704034 ~ 706471 (-) |
| G2093023 | NA | non-coding | downstream | 353095 | 518427 ~ 518709 (-) |
| G2093021 | NA | non-coding | downstream | 355301 | 516165 ~ 516503 (-) |
| G2093310 | lsm7 | non-coding | upstream | 80725 | 952931 ~ 954323 (-) |
| G2093316 | NA | non-coding | upstream | 84859 | 957065 ~ 957363 (-) |
| G2093424 | NA | non-coding | upstream | 143175 | 1015381 ~ 1015763 (-) |
| G2093490 | NA | non-coding | upstream | 233196 | 1105402 ~ 1107594 (-) |
| G2093491 | NA | non-coding | upstream | 235996 | 1108202 ~ 1108464 (-) |
| G2092886 | NA | other | downstream | 536865 | 334529 ~ 334939 (-) |
| G2093433 | NA | other | upstream | 163222 | 1035428 ~ 1035674 (-) |
| G2093581 | LOC106600502 | other | upstream | 283828 | 1156034 ~ 1164637 (-) |
| LOC110508327 | lig1 | other | upstream | 831607 | 1703128 ~ 1742400 (-) |
| G2094433 | LOC106600477 | other | upstream | 1034701 | 1906907 ~ 1907412 (-) |
| G2096163 | NA | other | upstream | 2436938 | 3309144 ~ 3309674 (-) |
