G2093631


Basic Information

Item Value
gene id G2093631
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 1221831 ~ 1222188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2394931
gtgggagccattctttctcagcgctccctctctgacgacaaggtccacccatgcgcgtatttttctcatcgcctgtcgccgtcggaacgtaactatgatgtgggtaaccgcgaactgctcgccatccggttagccctaggcgaatggcgacagtggttggagggggcgaccgttccttttgtcgtttggactgaccataggaaccttgagtacatccgttctgccaaacgacttaatgcgcgtcaggcgctgtttttcgctcgtttcgagttcgtgatttcttatcgtccgggctctaagaacaccaagcctgatgctttgtctcgtctcttcagttcttcagtagcctccactgacc

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2394931 True 358 lncRNA 0.54 1 1221831 1222188

Neighbor

gene id symbol gene type direction distance location
LOC110509188 LOC106600502 coding upstream 60906 1125824 ~ 1160925 (+)
prkci LOC106600503 coding upstream 114233 1036522 ~ 1107598 (+)
LOC110508316 LOC106600506 coding upstream 217540 996942 ~ 1004291 (+)
LOC110508203 LOC106600526 coding upstream 235239 984456 ~ 986592 (+)
LOC110508314 LOC106600507 coding upstream 237639 970023 ~ 984192 (+)
LOC110509189 LOC106600499 coding downstream 21780 1243968 ~ 1317532 (+)
LOC110508321 LOC106600497 coding downstream 180539 1402727 ~ 1414817 (+)
LOC110508331 LOC106600487 coding downstream 569531 1791719 ~ 1798195 (+)
LOC110508332 LOC106600484 coding downstream 581606 1803794 ~ 1836904 (+)
LOC110508334 LOC106600477 coding downstream 626327 1848515 ~ 1918387 (+)
G2093500 NA non-coding upstream 106836 1114699 ~ 1114995 (+)
G2093378 NA non-coding upstream 191037 1030375 ~ 1030794 (+)
G2093365 NA non-coding upstream 204071 1017533 ~ 1017760 (+)
G2093363 NA non-coding upstream 205289 1016076 ~ 1016542 (+)
G2093326 NA non-coding upstream 255583 966011 ~ 966248 (+)
G2093640 NA non-coding downstream 7300 1229488 ~ 1229698 (+)
G2093644 NA non-coding downstream 8764 1230952 ~ 1231152 (+)
G2093645 NA non-coding downstream 9205 1231393 ~ 1231680 (+)
G2093646 NA non-coding downstream 9590 1231778 ~ 1232032 (+)
G2093826 NA non-coding downstream 136394 1358582 ~ 1358870 (+)
G2092558 NA other upstream 527173 694133 ~ 694658 (+)
G2093889 NA other downstream 222445 1444633 ~ 1446121 (+)
G2093960 mpz other downstream 461918 1684106 ~ 1696486 (+)
LOC110509192 LOC106600604 other downstream 871956 2094076 ~ 2190557 (+)
G2094884 NA other downstream 1431675 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 1678662 2900784 ~ 2969598 (+)

Expression


Co-expression Network