G2093880


Basic Information

Item Value
gene id G2093880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 1427771 ~ 1487137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2395189
gaacagagtaacccatggtggcggtggggttatgttatgggcaggcataagttcttagggctgcaatcccgttaacgggatgatatgacaacagccagtgaaagtgcagggcgccaaattcaaaacagaaatctcataattaaaattcctcaaacatacatgtatcttataccgttttaaaggtaatcttgttgttaatcacACCACGGTgttcgatttcaaataggctttacagaaaaagcaccacaaatgattatgttaggtcaccaccaactcacagacaAATTCAATTTTTCcagacaaagagaggagtcacaaaaagcacaaatagagaaaaaaatgtatcactaacctgatgatcttcatcagatgacactcataggacttcatgttacacaatacatgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2395189 True 407 lncRNA 0.39 2 1427771 1487137

Neighbor

gene id symbol gene type direction distance location
LOC110508321 LOC106600497 coding upstream 12954 1402727 ~ 1414817 (+)
LOC110509189 LOC106600499 coding upstream 110239 1243968 ~ 1317532 (+)
LOC110509188 LOC106600502 coding upstream 266846 1125824 ~ 1160925 (+)
prkci LOC106600503 coding upstream 320173 1036522 ~ 1107598 (+)
LOC110508316 LOC106600506 coding upstream 423480 996942 ~ 1004291 (+)
LOC110508331 LOC106600487 coding downstream 304582 1791719 ~ 1798195 (+)
LOC110508332 LOC106600484 coding downstream 316657 1803794 ~ 1836904 (+)
LOC110508334 LOC106600477 coding downstream 361378 1848515 ~ 1918387 (+)
LOC110509192 LOC106600604 coding downstream 606939 2094076 ~ 2190557 (+)
LOC110508337 scg2 coding downstream 972495 2459632 ~ 2464135 (+)
G2093838 NA non-coding upstream 63166 1364123 ~ 1364605 (+)
G2093830 NA non-coding upstream 66982 1360549 ~ 1360789 (+)
G2093826 NA non-coding upstream 68901 1358582 ~ 1358870 (+)
G2093646 NA non-coding upstream 195739 1231778 ~ 1232032 (+)
G2093645 NA non-coding upstream 196091 1231393 ~ 1231680 (+)
G2093938 NA non-coding downstream 38109 1525246 ~ 1525596 (+)
G2093947 NA non-coding downstream 47900 1535037 ~ 1535254 (+)
G2094023 LOC106600492 non-coding downstream 160918 1648055 ~ 1649497 (+)
G2094029 NA non-coding downstream 170164 1657301 ~ 1659752 (+)
G2094032 NA non-coding downstream 175853 1662990 ~ 1665116 (+)
G2092558 NA other upstream 733113 694133 ~ 694658 (+)
G2093960 mpz other downstream 196969 1684106 ~ 1696486 (+)
G2094884 NA other downstream 1166726 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 1413713 2900784 ~ 2969598 (+)
G2095895 LOC106600579 other downstream 1854047 3341184 ~ 3341519 (+)

Expression


Co-expression Network