G2094624


Basic Information

Item Value
gene id G2094624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 2204786 ~ 2207029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2396019
GTCTCAATGGAGGCCTTTATTCCAATTAAACAAAGAAGTCATGAACAGCAGTTAGTTTGGAAAATAATTACATTCAAAATGTGCCACTTACCAAAAATACAGCTAAACTTTTAAAACCGCAGTTCATATAATAGTTCTAGGTTTGTgaaattccagtaactttccccAAACTCCCAGGCTTTCCAACAATCCTAGTTTGAATGTTCCCGGAATCAGGAGGAAATAGCTGAATATCCAGAGAATCCTCCCAACAGGGATTTCtgaaaaacctgggaattttagGAAAGTTACCAGAATTGTTCAACCCTAAACAGATCATATGATTTTGGTGGAATGGGTCTTAAATAAACATGTTTGTTTCCTCAAGTTTCTAATGTTCACCATAAAGTCGTACTTTAATTACTATCAGACATCTGTACAACATACTTCCTGTCCATCAGTcccctgtccacacacacacattcacacgttgtttatatttattttcttaAATGTTGCTTGGCTTATTATAATACATTTACAACCAGTCCAAAGATATACACATCTCAGTACCATTTCTGTGTTTTTAAGTTATCTGACTGATAGGAGCGGACTTGTTCTAAAAACCAGAGAAGCAGAGTAGTTTTGGTATGAATATGGCTGAAGAAAAACCATGAGTCAGTtggagcatcccaaatggcaccctagtgcctacatagagcactacctTTGAGTAGTGTAAAACGGACTGCTTCCAGtatctccagagagagagagagaaagagagaaagagagaaaagaagtGTGTATATTAGAGGATATTGGTCATTTCTGATGCGTGCTGGGGCCTTTACACAGGCACGCAAgcgcacacacaaatgcacgcacacacagggcTGTATTAGGAGGTAAGAGTCTACCATATAGCTCATTACATGACATACAGGTACATAATGGGCTGCGTatctaatggcaccctataccctatatagtgcactacttttgatgatgCACTAGATAGAGAGtagagtaccatttgggacgcaagtaCACTCTCCCAGCTCTGTACTttagaaacagcagagggagacaaaGCCACTTTATTTACAGACATTCATTGATTCTCTAGTTGAGCCCACAGAGAGAAGAGGTGCCTGAACGAACAGCATATAGAAAATAAAGGTAAGGTAAGTATTTTCCCCTATATAGCTCAGCATTTTCATTTtggaccaaggcccatagggctctgttcagaAGTTGTTTTGGGACGCCGACATTGTGTTGGTAGAGGAGCTGAAGGTGTCCCAGCAAACAGAGAGACCAagcaagagacagacagacctctctaTACGGTCTGGTCTGTATGTCCTTAACAggtaaatatactgtacagtgtaggctaaatactgtTTAGTGCAGCCAGAATAGTGGATCGATAGACCCTCCCCCTGCAATACTGACGCCACTGTTGGGAGACTGAGGTTACTGAGGCCTGCCTGACAGACCCACCTTTCCTGAACATATCAAGGTTGTTACTCCACCCTAACCATAATATAGTGTCTGTCCTCTCTTCAACGCTCCATCCGGACAGTATCCTCCATTCGGCCAGTCTATCCAGACGAGAGGCTAACTCAGGTACTGGGCCATGGAAATCCAGTGTATGGACAGAAGTGGATTTTTGTCTTTGGCAGTAAGTGCCACAAATCcagaagaggaggggggaagcACACATGTTTGCAGCCAAGTGCAAAGAGTCTCAACTTGGTTGGTTTATTGGTCGTGGATAATAAGTCCACCTTTGTTTTTTACCATGTATCCATACAGGTCTGGTCTGTGGGGGATGGAATCTGAGGTGTGCTGTGAATGACCACGGGTTAGAGGAAGAAGAGGCTTGGGATTGGTCTGGGTTGAGAGCTCTGTTTGgtcatggtggtggtgttgttcaGAGAGTAGGCCGGGGTTGTATTCATTACCATAGACCGTAACAAACACTGATCCTGGGTCAGTTTGGCATTCTCCCCaccaatggttaaggttaggattgggcgAGCGTAAGTCTCTCCTCTGGTTTCTACCTAAAGATACCCTCATACTCCAGCAGGATGAGCTCCACTATCTGGTTCTGATAGACCATGTGGACTGCCATGTTCCAGGTCTCTGTCTCGGGTCTGAGCAGGGTGGGGCCAAACACTATGGCTACGCTCTGGGTCGTCATACGGTTCTCCTCGCCATGGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2396019 True 2215 lncRNA 0.44 2 2204786 2207029

Neighbor

gene id symbol gene type direction distance location
LOC110509192 LOC106600604 coding upstream 14229 2094076 ~ 2190557 (+)
LOC110508334 LOC106600477 coding upstream 286399 1848515 ~ 1918387 (+)
LOC110508332 LOC106600484 coding upstream 367882 1803794 ~ 1836904 (+)
LOC110508331 LOC106600487 coding upstream 406591 1791719 ~ 1798195 (+)
LOC110508321 LOC106600497 coding upstream 789969 1402727 ~ 1414817 (+)
LOC110508337 scg2 coding downstream 252603 2459632 ~ 2464135 (+)
LOC110508340 LOC106600596 coding downstream 270729 2477758 ~ 2483196 (+)
LOC118944816 NA coding downstream 289700 2496729 ~ 2508118 (+)
LOC110508342 LOC106600594 coding downstream 315805 2522834 ~ 2628565 (+)
LOC110508345 LOC106569642 coding downstream 454851 2661880 ~ 2665151 (+)
G2094599 NA non-coding upstream 119557 2084981 ~ 2085229 (+)
G2094595 NA non-coding upstream 127754 2076744 ~ 2077032 (+)
G2094523 NA non-coding upstream 227215 1977359 ~ 1977571 (+)
G2094519 NA non-coding upstream 228454 1976126 ~ 1976332 (+)
G2093960 mpz non-coding upstream 508300 1684106 ~ 1696486 (+)
G2094739 NA non-coding downstream 158158 2365187 ~ 2367680 (+)
G2094821 NA non-coding downstream 260852 2467881 ~ 2476225 (+)
G2094841 NA non-coding downstream 324621 2531650 ~ 2531958 (+)
G2094799 NA non-coding downstream 368332 2575361 ~ 2579828 (+)
G2093889 NA other upstream 758665 1444633 ~ 1446121 (+)
G2092558 NA other upstream 1510128 694133 ~ 694658 (+)
G2094884 NA other downstream 446834 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 693821 2900784 ~ 2969598 (+)
G2095895 LOC106600579 other downstream 1134155 3341184 ~ 3341519 (+)
G2096475 NA other downstream 1680351 3887380 ~ 3907871 (+)
G2096472 NA other downstream 1692557 3899586 ~ 3917985 (+)

Expression


Co-expression Network