G2094821


Basic Information

Item Value
gene id G2094821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 2467881 ~ 2476225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2396232
TCTTCTGATAAGCAACCTTAGGAGAGGAGAGCACACCGCTTGCTAttcatctcccctccccctccctcctgtaCACTACCCTTCTCACTTCTTGTAGACGATCTTCAGGTCTTTCCAGTGCAGGAAGTTGCAGGAGCGTGGTTTCCGTCCCAACACCATGGTGGTCATGTCCCTGACGATCTTCTTCTTCTCTCGCTCAGGGATGGGCGTGAACCACTTCTGGAGGCGGAGCTTGCCTTGGCGACTGAAGAGCAGCAGGAAATGCATCTACAGGAAAAGATGCACCACAAGCACCTGAAAGAGACAGAAGCCCAAGACACAGAAGGAGAACAAACCC

Function

NR:

description
AP-1 complex subunit sigma-3-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2396232 True 337 lncRNA 0.53 2 2467881 2476225

Neighbor

gene id symbol gene type direction distance location
LOC110508337 scg2 coding upstream 3746 2459632 ~ 2464135 (+)
LOC110509192 LOC106600604 coding upstream 277324 2094076 ~ 2190557 (+)
LOC110508334 LOC106600477 coding upstream 549494 1848515 ~ 1918387 (+)
LOC110508332 LOC106600484 coding upstream 630977 1803794 ~ 1836904 (+)
LOC110508331 LOC106600487 coding upstream 669686 1791719 ~ 1798195 (+)
LOC110508340 LOC106600596 coding downstream 1533 2477758 ~ 2483196 (+)
LOC118944816 NA coding downstream 20504 2496729 ~ 2508118 (+)
LOC110508342 LOC106600594 coding downstream 46609 2522834 ~ 2628565 (+)
LOC110508345 LOC106569642 coding downstream 185655 2661880 ~ 2665151 (+)
LOC110509193 LOC106600589 coding downstream 258346 2734571 ~ 2810333 (+)
G2094739 NA non-coding upstream 100201 2365187 ~ 2367680 (+)
G2094624 NA non-coding upstream 260852 2204786 ~ 2207029 (+)
G2094599 NA non-coding upstream 382652 2084981 ~ 2085229 (+)
G2094595 NA non-coding upstream 390849 2076744 ~ 2077032 (+)
G2094523 NA non-coding upstream 490310 1977359 ~ 1977571 (+)
G2094841 NA non-coding downstream 55425 2531650 ~ 2531958 (+)
G2094799 NA non-coding downstream 99136 2575361 ~ 2579828 (+)
G2094866 LOC106581475 non-coding downstream 159281 2635506 ~ 2636085 (+)
G2094867 NA non-coding downstream 160121 2636346 ~ 2636591 (+)
G2093960 mpz other upstream 773412 1684106 ~ 1696486 (+)
G2093889 NA other upstream 1021760 1444633 ~ 1446121 (+)
G2092558 NA other upstream 1773223 694133 ~ 694658 (+)
G2094884 NA other downstream 177638 2653863 ~ 2655091 (+)
yeats2 yeats2 other downstream 424625 2900784 ~ 2969598 (+)
G2095895 LOC106600579 other downstream 864959 3341184 ~ 3341519 (+)
G2096475 NA other downstream 1411155 3887380 ~ 3907871 (+)
G2096472 NA other downstream 1423361 3899586 ~ 3917985 (+)

Expression


Co-expression Network