G2095895 (LOC106600579)


Basic Information

Item Value
gene id G2095895
gene name LOC106600579
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 3341184 ~ 3341519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2397376
CGTGCTCAATGTCACTCTCCTTCTCCGCCATCTTCTCAAAGTCCCTGATTGCAGAGCGAGCTGTCAGCTGGTGGATAATTTCCTCCCAGaggtctccccctcctcccccttctcctcctcccccggATGTCCCTCCTGTCCCTTGGTCCTCAGGGACCCAGAGTTGTGTCAGGTCCACGGTGACCTCCCAGGATACAGGCCTGCTTCCTAGGAGGCCGTGGATGAGGGAGCGGCACTGGGCAGGGGGCGTGGGGGGGTCGTCCGGGGGGGCGGCGGTAAACAGGTACTCCGGGTCAGTGAAGCTGTCccagtccagaggagagacagggaacagca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2397376 True 336 TUCP 0.63 1 3341184 3341519

Neighbor

gene id symbol gene type direction distance location
alg3 alg3 coding upstream 6170 3326414 ~ 3335014 (+)
yeats2 yeats2 coding upstream 371586 2900784 ~ 2969598 (+)
LOC110508347 LOC106600588 coding upstream 449080 2837162 ~ 2892104 (+)
LOC110509193 LOC106600589 coding upstream 530851 2734571 ~ 2810333 (+)
LOC118944856 NA coding upstream 588293 2748932 ~ 2752891 (+)
LOC110508353 LOC106600578 coding downstream 49920 3391439 ~ 3396051 (+)
LOC110508354 LOC106600577 coding downstream 58740 3400259 ~ 3416450 (+)
LOC110508355 pls2 coding downstream 91728 3433247 ~ 3437957 (+)
ccl20a.3 LOC106600611 coding downstream 159325 3500844 ~ 3501988 (+)
LOC110508359 LOC106600572 coding downstream 231632 3573151 ~ 3639849 (+)
G2095769 NA non-coding upstream 1019 3339394 ~ 3340165 (+)
G2095894 LOC106600579 non-coding upstream 2143 3338597 ~ 3339041 (+)
G2095768 NA non-coding upstream 32006 3308245 ~ 3309178 (+)
G2095877 NA non-coding upstream 52085 3288494 ~ 3289099 (+)
G2095875 NA non-coding upstream 54148 3286822 ~ 3287036 (+)
G2095917 NA non-coding downstream 37631 3379150 ~ 3379789 (+)
G2096345 LOC106600570 non-coding downstream 335980 3677499 ~ 3679505 (+)
G2096365 NA non-coding downstream 372806 3714325 ~ 3722938 (+)
G2096381 NA non-coding downstream 399123 3740642 ~ 3740859 (+)
G2096382 NA non-coding downstream 399771 3741290 ~ 3741511 (+)
G2094884 NA other upstream 686093 2653863 ~ 2655091 (+)
LOC110509192 LOC106600604 other upstream 1157566 2094076 ~ 2190557 (+)
G2093960 mpz other upstream 1646715 1684106 ~ 1696486 (+)
G2093889 NA other upstream 1895063 1444633 ~ 1446121 (+)
G2096475 NA other downstream 545861 3887380 ~ 3907871 (+)
G2096472 NA other downstream 558067 3899586 ~ 3917985 (+)
G2097031 NA other downstream 1194557 4536076 ~ 4536894 (+)
slc17a9b LOC106600547 other downstream 1369953 4682499 ~ 4714289 (+)
G2098625 NA other downstream 2627042 5968561 ~ 5998314 (+)

Expression


Co-expression Network