Gene
RNA
| Item | Value |
|---|---|
| gene id | G2096475 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 3887380 ~ 3907871 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| vegetative cell wall protein gp1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2398082 | True | 718 | TUCP | 0.46 | 2 | 3887380 | 3907871 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100653486 | LOC106600564 | coding | upstream | 72490 | 3797542 ~ 3814890 (+) |
| LOC110508367 | LOC106600566 | coding | upstream | 95781 | 3790194 ~ 3791599 (+) |
| LOC110508366 | LOC106600565 | coding | upstream | 100746 | 3776296 ~ 3786634 (+) |
| LOC110508363 | LOC106600569 | coding | upstream | 178728 | 3701897 ~ 3708652 (+) |
| aknad1 | LOC106600569 | coding | upstream | 183613 | 3696204 ~ 3703767 (+) |
| LOC118944845 | NA | coding | downstream | 62481 | 3970352 ~ 3972045 (+) |
| LOC110508370 | LOC106600557 | coding | downstream | 352836 | 4260707 ~ 4280126 (+) |
| LOC110508371 | LOC106600556 | coding | downstream | 381446 | 4289317 ~ 4338388 (+) |
| LOC110508372 | LOC106600555 | coding | downstream | 431283 | 4339154 ~ 4343438 (+) |
| LOC110509198 | LOC106600553 | coding | downstream | 464926 | 4372797 ~ 4378889 (+) |
| G2096461 | NA | non-coding | upstream | 13753 | 3861807 ~ 3873627 (+) |
| G2096462 | NA | non-coding | upstream | 23015 | 3862830 ~ 3864365 (+) |
| G2096448 | NA | non-coding | upstream | 50175 | 3836209 ~ 3837205 (+) |
| G2096431 | NA | non-coding | upstream | 51371 | 3835666 ~ 3836009 (+) |
| G2096426 | NA | non-coding | upstream | 52364 | 3834512 ~ 3835016 (+) |
| G2096491 | NA | non-coding | downstream | 40290 | 3948161 ~ 3948541 (+) |
| G2096492 | NA | non-coding | downstream | 42611 | 3950482 ~ 3950689 (+) |
| G2096496 | NA | non-coding | downstream | 48463 | 3956334 ~ 3956594 (+) |
| G2096499 | NA | non-coding | downstream | 50770 | 3958641 ~ 3960099 (+) |
| G2096546 | NA | non-coding | downstream | 182525 | 4090396 ~ 4090613 (+) |
| G2095895 | LOC106600579 | other | upstream | 545861 | 3341184 ~ 3341519 (+) |
| yeats2 | yeats2 | other | upstream | 980175 | 2900784 ~ 2969598 (+) |
| G2094884 | NA | other | upstream | 1232289 | 2653863 ~ 2655091 (+) |
| LOC110509192 | LOC106600604 | other | upstream | 1703762 | 2094076 ~ 2190557 (+) |
| G2093960 | mpz | other | upstream | 2192911 | 1684106 ~ 1696486 (+) |
| G2097031 | NA | other | downstream | 628205 | 4536076 ~ 4536894 (+) |
| slc17a9b | LOC106600547 | other | downstream | 803601 | 4682499 ~ 4714289 (+) |
| G2098625 | NA | other | downstream | 2060690 | 5968561 ~ 5998314 (+) |
| G2098849 | NA | other | downstream | 2181857 | 6089728 ~ 6090062 (+) |
| LOC110509204 | prpf6 | other | downstream | 2215857 | 6123728 ~ 6157102 (+) |
