G2096472


Basic Information

Item Value
gene id G2096472
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 3899586 ~ 3917985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2398079
gtccattatactgtaccttcctatcccacactgtcaattatactgtaccttcctatcccacacgctgtccactatactgtaccttcttatcccacactctgtccactatactgtaccttcctatcccacactctgtccactatactgtaccttcttatcccacactctgtcctttatactgtaccttcctatcccacactctgtccactatactgtacctttctatcccacactctgtccactatactgtaccttcctatcccacactctgtccattatactgtaccttcctatgccgcactctgtccattatactgtaccttcctatcccacactgtccattatactgtaccttcctatcccacactctgtccactatactgtaccttcctatcccaaactctgtccattatactgtaccttcctatcccacactctgtccactatactgtaccttcctatcccacactctgtccactatactgtaccttcctaacCCACAGTCtgcccattatactgtaccttcctatcccacacgctgtccattatactgtaccttcctatcccacactctgtccactatactgtaccttcctatcccacactctgtccactatactgtaccttcctatcctaaactctgtccactatactgtaccttcctatcccacactctgtccattatactgtaccttcctaccccacactctgtccactatactgtaccttcctatcccacactctgtccacaaTACTGTAcattcctatcccacactctgtccactataatgtaccttcctatcccacactctgtccacaatactgtaccttcctatcccacactctgtccactataatgtaccttcctatcccacactcgtccactatactgtaccttcctatcccacactctgtccattatactgtaccttcctatcccacactctgtccattatactgtaccttcctatctcacactctgtccactatcctgtaccttcttatcccacactctgtccattatactgtaccttcctatcccacactctgtccattatactgtaccttcctatcccacactctgtccaccataatgtaccttcctatcccacactctgtccattatactgtaccttcctatcccacactctgtccattatactgtaccttcctatcccacactctgtccactatactgtaccttcctatcccacactctgtccattatactgtaccttcctatcccacactctg

Function

NR:

description
vegetative cell wall protein gp1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2398079 True 1254 TUCP 0.45 2 3899586 3917985

Neighbor

gene id symbol gene type direction distance location
LOC100653486 LOC106600564 coding upstream 84696 3797542 ~ 3814890 (+)
LOC110508367 LOC106600566 coding upstream 107987 3790194 ~ 3791599 (+)
LOC110508366 LOC106600565 coding upstream 112952 3776296 ~ 3786634 (+)
LOC110508363 LOC106600569 coding upstream 190934 3701897 ~ 3708652 (+)
aknad1 LOC106600569 coding upstream 195819 3696204 ~ 3703767 (+)
LOC118944845 NA coding downstream 52367 3970352 ~ 3972045 (+)
LOC110508370 LOC106600557 coding downstream 342722 4260707 ~ 4280126 (+)
LOC110508371 LOC106600556 coding downstream 371332 4289317 ~ 4338388 (+)
LOC110508372 LOC106600555 coding downstream 421169 4339154 ~ 4343438 (+)
LOC110509198 LOC106600553 coding downstream 454812 4372797 ~ 4378889 (+)
G2096461 NA non-coding upstream 25959 3861807 ~ 3873627 (+)
G2096462 NA non-coding upstream 35221 3862830 ~ 3864365 (+)
G2096448 NA non-coding upstream 62381 3836209 ~ 3837205 (+)
G2096431 NA non-coding upstream 63577 3835666 ~ 3836009 (+)
G2096426 NA non-coding upstream 64570 3834512 ~ 3835016 (+)
G2096491 NA non-coding downstream 30176 3948161 ~ 3948541 (+)
G2096492 NA non-coding downstream 32497 3950482 ~ 3950689 (+)
G2096496 NA non-coding downstream 38349 3956334 ~ 3956594 (+)
G2096499 NA non-coding downstream 40656 3958641 ~ 3960099 (+)
G2096546 NA non-coding downstream 172411 4090396 ~ 4090613 (+)
G2095895 LOC106600579 other upstream 558067 3341184 ~ 3341519 (+)
yeats2 yeats2 other upstream 992381 2900784 ~ 2969598 (+)
G2094884 NA other upstream 1244495 2653863 ~ 2655091 (+)
LOC110509192 LOC106600604 other upstream 1715968 2094076 ~ 2190557 (+)
G2093960 mpz other upstream 2205117 1684106 ~ 1696486 (+)
G2097031 NA other downstream 618091 4536076 ~ 4536894 (+)
slc17a9b LOC106600547 other downstream 793487 4682499 ~ 4714289 (+)
G2098625 NA other downstream 2050576 5968561 ~ 5998314 (+)
G2098849 NA other downstream 2171743 6089728 ~ 6090062 (+)
LOC110509204 prpf6 other downstream 2205743 6123728 ~ 6157102 (+)

Expression


Co-expression Network