Gene
RNA
| Item | Value |
|---|---|
| gene id | G2096732 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 3947275 ~ 3947625 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: hyphally regulated cell wall protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2398410 | True | 351 | TUCP | 0.39 | 1 | 3947275 | 3947625 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509196 | LOC106600560 | coding | downstream | 60202 | 3815075 ~ 3887073 (-) |
| LOC118944868 | NA | coding | downstream | 172625 | 3773505 ~ 3774650 (-) |
| fam102ba | LOC106600567 | coding | downstream | 192017 | 3739404 ~ 3755258 (-) |
| prpf38b | LOC106600568 | coding | downstream | 217142 | 3713128 ~ 3730133 (-) |
| gpsm2 | LOC106600570 | coding | downstream | 252452 | 3671574 ~ 3694823 (-) |
| LOC110509197 | LOC106600559 | coding | upstream | 11012 | 3958637 ~ 4087126 (-) |
| LOC110508373 | LOC106600554 | coding | upstream | 401880 | 4349502 ~ 4357045 (-) |
| LOC110508374 | LOC100196681 | coding | upstream | 470200 | 4417825 ~ 4482014 (-) |
| trnas-uga-86 | NA | coding | upstream | 607773 | 4555398 ~ 4555479 (-) |
| trnas-uga-87 | NA | coding | upstream | 609390 | 4557015 ~ 4557096 (-) |
| G2096718 | NA | non-coding | downstream | 24116 | 3922819 ~ 3923159 (-) |
| G2096694 | NA | non-coding | downstream | 29112 | 3887171 ~ 3918163 (-) |
| G2096698 | NA | non-coding | downstream | 43873 | 3894791 ~ 3903402 (-) |
| G2096713 | NA | non-coding | downstream | 64575 | 3882449 ~ 3882700 (-) |
| G2096710 | NA | non-coding | downstream | 73524 | 3865586 ~ 3873751 (-) |
| G2096731 | NA | non-coding | upstream | 2491 | 3949337 ~ 3951021 (-) |
| G2096734 | NA | non-coding | upstream | 8666 | 3956291 ~ 3956683 (-) |
| G2096810 | NA | non-coding | upstream | 159241 | 4106866 ~ 4107206 (-) |
| G2096817 | NA | non-coding | upstream | 163448 | 4111073 ~ 4111405 (-) |
| G2096828 | NA | non-coding | upstream | 170075 | 4117700 ~ 4118338 (-) |
| G2096163 | NA | other | downstream | 637601 | 3309144 ~ 3309674 (-) |
| G2094433 | LOC106600477 | other | downstream | 2039863 | 1906907 ~ 1907412 (-) |
| LOC110508327 | lig1 | other | downstream | 2204875 | 1703128 ~ 1742400 (-) |
| G2093581 | LOC106600502 | other | downstream | 2782638 | 1156034 ~ 1164637 (-) |
| G2093433 | NA | other | downstream | 2911601 | 1035428 ~ 1035674 (-) |
| G2097165 | NA | other | upstream | 376849 | 4324474 ~ 4324977 (-) |
| LOC110508393 | LOC106600538 | other | upstream | 1918516 | 5866119 ~ 5952354 (-) |
| G2098765 | NA | other | upstream | 1997514 | 5945139 ~ 5946875 (-) |
| G2098763 | NA | other | upstream | 1999510 | 5947135 ~ 5949100 (-) |
