G2096499


Basic Information

Item Value
gene id G2096499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 3958641 ~ 3960099 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2398109
TCATTACGTTTCTGCAGCTTTATTAAGAATGGAACACAACAGCAGGACAGGAAGTCATAACACCAACAAAAAGGGATTACGCCCAATCAAATATCAGAAGAACCATATGTATTACGAATCATGGCATCCTGCCCCTCACATATTGGAGCCGGGCAAAGATTACCAAGTTAAGTTTTGTCCCAGTCCGCAGTATTTCGATCTATCCTATTCCATCTAGATCAATGGGTGTGTTTTAGTTGTTATTTGAGAGGGCGATACGGAGTACATGACTGGTACATGACTGGTACATGGCTGGGTCATGGCTGGTACATGACTGGGTCATGACTGGTACATGACTGGGTCATGACAAGGCTCAGGTATCAATCAGATACCAGtcaataacaaacaaacaaaacaccacagtatttacagtacagagacaggcCATCAAAGGGTTACCTTCATTACTTTTGATTGTAAGAATGGTATATACAACAAAAAGGTATTACATTGCCTCGTTGGATTATGTCAAAACAaatcaacatactgtatattaacttGGGTTACCTTCATTACTTTTGATTGTAAGAATGGTATATACAACAAAAAGGTATTACATTGCCTCGTTGGATTATGTCAAAACAaatcaacatactgtatattaacttGCGAAGAGTCCATAATAAATAGTAACATGAAGAGATAGCAAATATTAAAAATGGCATGAAAGTTGAATAATAAAACAGACCTGCTATTCAGGAGTCCTAAAGAAACATAAcaaatacagtacacatacaaaaGCTCTGGGATATTTGAGACTGAAAGCTAACTAGCTCACTGGCATTAATTACATTTGTGCTTTAGAAACAGAATACTAAAATGAGTTCTGAGATGTAGAACAAGCTTCAAACGTTGCAGAACACATACACTCGCATAGCATagacaccctgacacacacacacacacacacgtcactgtCTATGTTTAGACAGCGAGAATAGGTTATCCATACACATGCCAAGGATTTGCTGTTTCTTAGATATTAGCGACCGTGTTAGCGAGAGAACAAGTATTACTGTTGTAATGGACCTGGGGTAAACAAAATCAACAACAAAGGAACAAATCCTCACTTTAGATATGTACGTGTGAACAattcactttttttgcactgatGTCAATAGGTCATTTGAATAAAAGTTTTGCACACATACAGTATCTCAAGTGAGGATTTAACCCAAAGAGACAGACTGAAATAGGTCAGGAAAAAATAAACGTCAACTATTGTCAGGGGTCCGGCACAGGGCATTATGGGAAGTGTAGTATTTGGTTCAGTAGGGGCTGTGGGCATCATCTTCCCTCTCCCTGTGtgcctctcctccatgtctcctgtggtTCCTGCGCTCCCGGCGCTGGCCGTGGTGGTGGTTGCGGCGGTACCGGTGGGATC
>TU2398111
TCATTACGTTTCTGCAGCTTTATTAAGAATGGAACACAACAGCAGGACAGGAAGTCATAACACCAACAAAAAGGGATTACGCCCAATCAAATATCAGAAGAACCATATGTATTACGAATCATGGCATCCTGCCCCTCACATATTGGAGCCGGGCAAAGATTACCAAGTTAAGTTTTGTCCCAGTCCGCAGTATTTCGATCTATCCTATTCCATCTAGATCAATGGGTGTGTTTTAGTTGTTATTTGAGAGGGCGATACGGAGTACATGACTGGTACATGACTGGGTCATGGCTGGTACATGACTGGTACATGACTGGTACATGGCTGGGTCATGGCTGGTACATGACTGGGTCATGACTGGTACATGACTGGGTCATGACAAGGCTCAGGTATCAATCAGATACCAGtcaataacaaacaaacaaaacaccacagtatttacagtacagagacaggcCATCAAAGGGTTACCTTCATTACTTTTGATTGTAAGAATGGTATATACAACAAAAAGGTATTACATTGCCTCGTTGGATTATGTCAAAACAaatcaacatactgtatattaacttGCGAAGAGTCCATAATAAATAGTAACATGAAGAGATAGCAAATATTAAAAATGGCATGAAAGTTGAATAATAAAACAGACCTGCTATTCAGGAGTCCTAAAGAAACATAAcaaatacagtacacatacaaaaGCTCTGGGATATTTGAGACTGAAAGCTAACTAGCTCACTGGCATTAATTACATTTGTGCTTTAGAAACAGAATACTAAAATGAGTTCTGAGATGTAGAACAAGCTTCAAACGTTGCAGAACACATACACTCGCATAGCATagacaccctgacacacacacacacacacacgtcactgtCTATGTTTAGACAGCGAGAATAGGTTATCCATACACATGCCAAGGATTTGCTGTTTCTTAGATATTAGCGACCGTGTTAGCGAGAGAACAAGTATTACTGTTGTAATGGACCTGGGGTAAACAAAATCAACAACAAAGGAACAAATCCTCACTTTAGATATGTACGTGTGAACAattcactttttttgcactgatGTCAATAGGTCATTTGAATAAAAGTTTTGCACACATACAGTATCTCAAGTGAGGATTTAACCCAAAGAGACAGACTGAAATAGGTCAGGAAAAAATAAACGTCAACTATTGTCAGGGGTCCGGCACAGGGCATTATGGGAAGTGTAGTATTTGGTTCAGTAGGGGCTGTGGGCATCATCTTCCCTCTCCCTGTGtgcctctcctccatgtctcctgtggtTCCTGCGCTCCCGGCGCTGGCCGTGGTGGTGGTTGCGGCGGTACCGGTGGGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2398109 False 1426 lncRNA 0.40 2 3958641 3960099
TU2398111 True 1351 lncRNA 0.41 2 3958641 3960099

Neighbor

gene id symbol gene type direction distance location
LOC100653486 LOC106600564 coding upstream 143751 3797542 ~ 3814890 (+)
LOC110508367 LOC106600566 coding upstream 167042 3790194 ~ 3791599 (+)
LOC110508366 LOC106600565 coding upstream 172007 3776296 ~ 3786634 (+)
LOC110508363 LOC106600569 coding upstream 249989 3701897 ~ 3708652 (+)
aknad1 LOC106600569 coding upstream 254874 3696204 ~ 3703767 (+)
LOC118944845 NA coding downstream 10253 3970352 ~ 3972045 (+)
LOC110508370 LOC106600557 coding downstream 300608 4260707 ~ 4280126 (+)
LOC110508371 LOC106600556 coding downstream 329218 4289317 ~ 4338388 (+)
LOC110508372 LOC106600555 coding downstream 379055 4339154 ~ 4343438 (+)
LOC110509198 LOC106600553 coding downstream 412698 4372797 ~ 4378889 (+)
G2096496 NA non-coding upstream 2047 3956334 ~ 3956594 (+)
G2096492 NA non-coding upstream 7952 3950482 ~ 3950689 (+)
G2096491 NA non-coding upstream 10100 3948161 ~ 3948541 (+)
G2096461 NA non-coding upstream 85014 3861807 ~ 3873627 (+)
G2096462 NA non-coding upstream 94276 3862830 ~ 3864365 (+)
G2096546 NA non-coding downstream 130297 4090396 ~ 4090613 (+)
G2096790 NA non-coding downstream 130826 4090925 ~ 4091262 (+)
G2096804 NA non-coding downstream 140729 4100828 ~ 4101145 (+)
G2096806 NA non-coding downstream 142662 4102761 ~ 4102983 (+)
G2096846 NA non-coding downstream 221105 4181204 ~ 4181431 (+)
G2096472 NA other upstream 40656 3899586 ~ 3917985 (+)
G2096475 NA other upstream 50770 3887380 ~ 3907871 (+)
G2095895 LOC106600579 other upstream 617122 3341184 ~ 3341519 (+)
yeats2 yeats2 other upstream 1051436 2900784 ~ 2969598 (+)
G2094884 NA other upstream 1303550 2653863 ~ 2655091 (+)
G2097031 NA other downstream 575977 4536076 ~ 4536894 (+)
slc17a9b LOC106600547 other downstream 751373 4682499 ~ 4714289 (+)
G2098625 NA other downstream 2008462 5968561 ~ 5998314 (+)
G2098849 NA other downstream 2129629 6089728 ~ 6090062 (+)
LOC110509204 prpf6 other downstream 2163629 6123728 ~ 6157102 (+)

Expression


Co-expression Network