G2096846


Basic Information

Item Value
gene id G2096846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 4181204 ~ 4181431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2398529
AATTTATGTAGGCTACAGAAATACTAATTTAAGTTTCCATTGTGATGGTGAGTATAGGCCTAGTGTCTCCTTTGTGACGAAAATGACTTCTGAAATCAATTATCCTGTTTTTCTACACAAAATAGGCATTTTATCTTGTAATACGTCTAGTCCAAATTGGCTTCCTTGTGTGAAGTTATGGCCTACGCCTTGTAACCTAGGATACTTACAGTTTTATGGTGGTAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2398529 True 228 lncRNA 0.36 1 4181204 4181431

Neighbor

gene id symbol gene type direction distance location
LOC118944845 NA coding upstream 209159 3970352 ~ 3972045 (+)
LOC100653486 LOC106600564 coding upstream 366314 3797542 ~ 3814890 (+)
LOC110508367 LOC106600566 coding upstream 389605 3790194 ~ 3791599 (+)
LOC110508366 LOC106600565 coding upstream 394570 3776296 ~ 3786634 (+)
LOC110508363 LOC106600569 coding upstream 472552 3701897 ~ 3708652 (+)
LOC110508370 LOC106600557 coding downstream 79276 4260707 ~ 4280126 (+)
LOC110508371 LOC106600556 coding downstream 107886 4289317 ~ 4338388 (+)
LOC110508372 LOC106600555 coding downstream 157723 4339154 ~ 4343438 (+)
LOC110509198 LOC106600553 coding downstream 191366 4372797 ~ 4378889 (+)
trnas-uga-85 NA coding downstream 205296 4386727 ~ 4386808 (+)
G2096806 NA non-coding upstream 78221 4102761 ~ 4102983 (+)
G2096804 NA non-coding upstream 80059 4100828 ~ 4101145 (+)
G2096790 NA non-coding upstream 89942 4090925 ~ 4091262 (+)
G2096546 NA non-coding upstream 90591 4090396 ~ 4090613 (+)
G2096499 NA non-coding upstream 221105 3958641 ~ 3960099 (+)
G2096848 NA non-coding downstream 5674 4187105 ~ 4228497 (+)
G2096861 NA non-coding downstream 20964 4202395 ~ 4203461 (+)
G2096863 NA non-coding downstream 23900 4205331 ~ 4206665 (+)
G2096869 NA non-coding downstream 34690 4216121 ~ 4216909 (+)
G2096921 NA non-coding downstream 162831 4344262 ~ 4344565 (+)
G2096472 NA other upstream 263219 3899586 ~ 3917985 (+)
G2096475 NA other upstream 273333 3887380 ~ 3907871 (+)
G2095895 LOC106600579 other upstream 839685 3341184 ~ 3341519 (+)
yeats2 yeats2 other upstream 1273999 2900784 ~ 2969598 (+)
G2094884 NA other upstream 1526113 2653863 ~ 2655091 (+)
G2097031 NA other downstream 354645 4536076 ~ 4536894 (+)
slc17a9b LOC106600547 other downstream 530041 4682499 ~ 4714289 (+)
G2098625 NA other downstream 1787130 5968561 ~ 5998314 (+)
G2098849 NA other downstream 1908297 6089728 ~ 6090062 (+)
LOC110509204 prpf6 other downstream 1942297 6123728 ~ 6157102 (+)

Expression


Co-expression Network