G2099375


Basic Information

Item Value
gene id G2099375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 6602019 ~ 6602819 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2401361
aacaCCCTTgcctttttttctctttttgcactgactttgctgatagctactttgaggaaaaatgtaattACTCtcactgagatgtggttgtcccacctagctatcttaagatgaatgcactaacggTCAGTTGCTCTGTATAAcattgtctgctaaattacaattGCTTTAGCTaactcctctgtctctcatacGCTAGGGTTATACGGTTTCAATGCCAAGGGGAAACATTCAATGGGTAATTTAATAAGCCTCACTGCTGATGATGTAATCATAATGATGTTGAAAATTATGTAAATCATCCTAAAACAGAATCACGGTAGTTCAATATCCACTGAATGAGTATGAATAGCAGCTATTCACTCTGTTATCCAAAGGTGTTTCTATCATATCACTGACAactttGCAACAACATAGCATCCTTCCCCTAACCCAactaatgttagccacaacaaattggaatttgtaacatatcatacagtcCAGGTTGGCATCACGTAGCCACATCTATACATCATGCATTTCAGATATAGTTCTTCCCTAGTTTGAACACTGTTATGGAGCTAATCTCTTTGTATCTTTCTGTATTTTCCTAAAGAGGATGTGAATAATTCATGTTAATGTGCATTTTGAACATTTTACTAAATTGTTAATCTACTTTGAATACGATTTGTAATTTTCTAGCATTGATCGAACACACACTCCAATATCTTAAAGTAAAAATTCTTGTTTGAGTACATGGCTAAATAAACATCAGTAAAATGAGCAGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2401361 True 770 lncRNA 0.35 2 6602019 6602819

Neighbor

gene id symbol gene type direction distance location
LOC118944893 NA coding downstream 28491 6573338 ~ 6573528 (-)
LOC118944894 NA coding downstream 28967 6572936 ~ 6573052 (-)
LOC110508399 LOC106600629 coding downstream 145937 6416696 ~ 6456082 (-)
LOC110508398 spata2 coding downstream 229764 6366083 ~ 6372255 (-)
LOC118944869 NA coding downstream 236337 6364380 ~ 6365682 (-)
LOC110508402 LOC106600630 coding upstream 356 6603175 ~ 6639138 (-)
LOC118944895 NA coding upstream 77687 6680506 ~ 6680622 (-)
LOC118944892 NA coding upstream 102042 6704861 ~ 6704979 (-)
LOC110508403 LOC106599971 coding upstream 149989 6752808 ~ 6799814 (-)
LOC110508405 LOC106599977 coding upstream 214415 6817234 ~ 6826618 (-)
G2099384 NA non-coding downstream 39752 6559904 ~ 6562267 (-)
G2099377 NA non-coding downstream 52452 6548898 ~ 6549567 (-)
G2099239 NA non-coding downstream 211345 6389544 ~ 6390674 (-)
G2099413 NA non-coding upstream 31139 6633958 ~ 6634479 (-)
G2099428 NA non-coding upstream 43178 6645997 ~ 6646308 (-)
G2099433 LOC101078606 non-coding upstream 45755 6648574 ~ 6648800 (-)
G2099835 NA non-coding upstream 85044 6687863 ~ 6688080 (-)
G2099839 NA non-coding upstream 87799 6690618 ~ 6690829 (-)
G2099318 NA other downstream 162923 6426170 ~ 6439096 (-)
G2098997 NA other downstream 363406 6238169 ~ 6238613 (-)
G2098996 NA other downstream 363925 6237433 ~ 6238094 (-)
G2098793 NA other downstream 602525 5995825 ~ 5999494 (-)
G2098766 NA other downstream 652406 5947738 ~ 5949613 (-)
G2100109 NA other upstream 600787 7203606 ~ 7206488 (-)
G2100707 NA other upstream 990475 7593294 ~ 7593815 (-)
LOC110508434 LOC106600027 other upstream 1165597 7767544 ~ 7837267 (-)
LOC110508443 LOC106600051 other upstream 1390592 7993411 ~ 8044009 (-)
G2101243 NA other upstream 1555400 8158219 ~ 8158518 (-)

Expression


Co-expression Network