Gene
RNA
| Item | Value |
|---|---|
| gene id | G2099433 |
| gene name | LOC101078606 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 6648574 ~ 6648800 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| piggyBac transposable element-derived protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2401420 | True | 227 | lncRNA | 0.48 | 1 | 6648574 | 6648800 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508402 | LOC106600630 | coding | downstream | 9436 | 6603175 ~ 6639138 (-) |
| LOC118944893 | NA | coding | downstream | 75046 | 6573338 ~ 6573528 (-) |
| LOC118944894 | NA | coding | downstream | 75522 | 6572936 ~ 6573052 (-) |
| LOC110508399 | LOC106600629 | coding | downstream | 192492 | 6416696 ~ 6456082 (-) |
| LOC110508398 | spata2 | coding | downstream | 276319 | 6366083 ~ 6372255 (-) |
| LOC118944895 | NA | coding | upstream | 31706 | 6680506 ~ 6680622 (-) |
| LOC118944892 | NA | coding | upstream | 56061 | 6704861 ~ 6704979 (-) |
| LOC110508403 | LOC106599971 | coding | upstream | 104008 | 6752808 ~ 6799814 (-) |
| LOC110508405 | LOC106599977 | coding | upstream | 168434 | 6817234 ~ 6826618 (-) |
| LOC110508409 | LOC106599985 | coding | upstream | 336940 | 6985437 ~ 7016472 (-) |
| G2099428 | NA | non-coding | downstream | 2266 | 6645997 ~ 6646308 (-) |
| G2099413 | NA | non-coding | downstream | 14095 | 6633958 ~ 6634479 (-) |
| G2099375 | NA | non-coding | downstream | 45755 | 6602019 ~ 6602819 (-) |
| G2099384 | NA | non-coding | downstream | 86307 | 6559904 ~ 6562267 (-) |
| G2099377 | NA | non-coding | downstream | 99007 | 6548898 ~ 6549567 (-) |
| G2099835 | NA | non-coding | upstream | 39063 | 6687863 ~ 6688080 (-) |
| G2099839 | NA | non-coding | upstream | 41818 | 6690618 ~ 6690829 (-) |
| G2099840 | NA | non-coding | upstream | 43355 | 6692155 ~ 6692411 (-) |
| G2099845 | LOC106568688 | non-coding | upstream | 48932 | 6697732 ~ 6698003 (-) |
| G2099847 | NA | non-coding | upstream | 50510 | 6699310 ~ 6699511 (-) |
| G2099318 | NA | other | downstream | 209478 | 6426170 ~ 6439096 (-) |
| G2098997 | NA | other | downstream | 409961 | 6238169 ~ 6238613 (-) |
| G2098996 | NA | other | downstream | 410480 | 6237433 ~ 6238094 (-) |
| G2098793 | NA | other | downstream | 649080 | 5995825 ~ 5999494 (-) |
| G2098766 | NA | other | downstream | 698961 | 5947738 ~ 5949613 (-) |
| G2100109 | NA | other | upstream | 554806 | 7203606 ~ 7206488 (-) |
| G2100707 | NA | other | upstream | 944494 | 7593294 ~ 7593815 (-) |
| LOC110508434 | LOC106600027 | other | upstream | 1119616 | 7767544 ~ 7837267 (-) |
| LOC110508443 | LOC106600051 | other | upstream | 1344611 | 7993411 ~ 8044009 (-) |
| G2101243 | NA | other | upstream | 1509419 | 8158219 ~ 8158518 (-) |
