G2099499


Basic Information

Item Value
gene id G2099499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 6726353 ~ 6727027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2401488
gtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaatatcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtttcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacgacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggaggattgtatttatcatcattagtcatttaggtcaacat

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2401488 True 675 lncRNA 0.43 1 6726353 6727027

Neighbor

gene id symbol gene type direction distance location
LOC110508401 LOC106600630 coding upstream 157787 6523039 ~ 6628031 (+)
zfp313 zfp313 coding upstream 336657 6381000 ~ 6389696 (+)
LOC110508396 LOC106600623 coding upstream 385394 6285145 ~ 6341018 (+)
LOC110509204 prpf6 coding upstream 570946 6123728 ~ 6157102 (+)
LOC110508385 LOC106600542 coding upstream 1229857 5392397 ~ 5496496 (+)
LOC110508406 LOC106599979 coding downstream 99561 6826588 ~ 6831152 (+)
LOC110508407 LOC106599981 coding downstream 107230 6834257 ~ 6891325 (+)
LOC110508408 LOC106569542 coding downstream 221401 6948428 ~ 6962016 (+)
LOC110508411 LOC106599988 coding downstream 303017 7030044 ~ 7039045 (+)
LOC110508413 LOC106599990 coding downstream 413126 7140153 ~ 7200444 (+)
G2099493 NA non-coding upstream 8553 6717502 ~ 6717800 (+)
G2099491 NA non-coding upstream 9722 6716394 ~ 6716631 (+)
G2099489 NA non-coding upstream 13140 6712952 ~ 6713213 (+)
G2099488 NA non-coding upstream 13479 6712516 ~ 6712874 (+)
G2099487 NA non-coding upstream 13993 6712046 ~ 6712360 (+)
G2099514 NA non-coding downstream 15687 6742714 ~ 6743461 (+)
G2099517 NA non-coding downstream 21885 6748912 ~ 6749140 (+)
G2099547 NA non-coding downstream 75880 6802907 ~ 6803289 (+)
G2099556 NA non-coding downstream 89049 6816076 ~ 6816295 (+)
G2099589 NA non-coding downstream 138957 6865984 ~ 6866218 (+)
G2099116 LOC106600629 other upstream 297416 6427205 ~ 6428937 (+)
G2100344 LOC107579696 other downstream 700544 7427571 ~ 7428415 (+)
G2100382 LOC106600009 other downstream 812162 7539189 ~ 7564546 (+)
G2101665 NA other downstream 1900945 8627972 ~ 8632449 (+)
G2102205 NA other downstream 2463934 9190961 ~ 9246215 (+)

Expression


Co-expression Network