G2100830


Basic Information

Item Value
gene id G2100830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 7837486 ~ 7837710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2402966
aattaagacattacaaatgacatatcatgtacagtggggagaacaagtatttgatatactgccgattttgcagggtttcctacttacaaagcatgtagaggtctgtaattttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaattttcattttattgcatgacataagtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2402966 True 225 lncRNA 0.31 1 7837486 7837710

Neighbor

gene id symbol gene type direction distance location
LOC110508433 LOC106599936 coding upstream 81723 7752516 ~ 7755763 (+)
LOC110508428 LOC106600017 coding upstream 196952 7630342 ~ 7640534 (+)
LOC110508426 LOC106600016 coding upstream 240086 7582726 ~ 7597400 (+)
LOC110508424 LOC106600007 coding upstream 300544 7532178 ~ 7536942 (+)
LOC110508421 LOC106600003 coding upstream 431024 7397243 ~ 7406462 (+)
LOC110508435 LOC106600034 coding downstream 4543 7842253 ~ 7857118 (+)
LOC110509206 LOC106600054 coding downstream 376142 8213852 ~ 8236601 (+)
LOC110508445 LOC106600060 coding downstream 405820 8243530 ~ 8249331 (+)
LOC110508447 LOC106600066 coding downstream 474771 8312481 ~ 8324892 (+)
LOC110508450 LOC106600084 coding downstream 553344 8391054 ~ 8408792 (+)
G2100571 NA non-coding upstream 160 7836985 ~ 7837326 (+)
G2100569 NA non-coding upstream 2731 7834509 ~ 7834755 (+)
G2100534 NA non-coding upstream 60344 7775658 ~ 7777142 (+)
G2100508 LOC106600027 non-coding upstream 65735 7767870 ~ 7771751 (+)
G2100496 NA non-coding upstream 128392 7708824 ~ 7709094 (+)
G2100870 NA non-coding downstream 46192 7883902 ~ 7886767 (+)
G2100936 NA non-coding downstream 143070 7980780 ~ 7981115 (+)
G2101090 NA non-coding downstream 219521 8057231 ~ 8057759 (+)
G2101091 NA non-coding downstream 220118 8057828 ~ 8058121 (+)
G2101113 NA non-coding downstream 245702 8083412 ~ 8083645 (+)
G2100382 LOC106600009 other upstream 272940 7539189 ~ 7564546 (+)
G2100344 LOC107579696 other upstream 409071 7427571 ~ 7428415 (+)
LOC110508407 LOC106599981 other upstream 990498 6834257 ~ 6891325 (+)
LOC110508401 LOC106600630 other upstream 1209455 6523039 ~ 6628031 (+)
G2099116 LOC106600629 other upstream 1408549 6427205 ~ 6428937 (+)
G2101665 NA other downstream 790262 8627972 ~ 8632449 (+)
G2102205 NA other downstream 1353251 9190961 ~ 9246215 (+)
G2102343 NA other downstream 1658851 9496561 ~ 9501330 (+)
G2102469 NA other downstream 1907963 9745673 ~ 9746174 (+)
G2102608 NA other downstream 2143299 9981009 ~ 9982191 (+)

Expression


Co-expression Network