G2101503 (LOC106600060)


Basic Information

Item Value
gene id G2101503
gene name LOC106600060
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 8243554 ~ 8245227 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2403706
CAGCACATGCCAGATGTTCTCATTGGCTCCCTCGAAGCTGCAGAAGCGTATGGAGACTCCCAGCAGGCCCTGGCCACCCCAGAGGTTGCTAGGGATGACGGTGGACTCCCTGAGCTCCAGAGTCTTAGAGGAGTAGACCAGCATCCTGACCGGCTTCTCCACACTGGCCTTCAATAGGTCCTTCAGGGTGTCATTGTCCTTGTTCAGTCTTTCATTGTTGATGGAGACGATGAAGTCAAAGAAAGGCTCCAGTCCTGCCCGGTGTCCCGGAGAGTTCTCCTGAACCCGAAGAACATGGTAGCCTTCGGATCCTCCTCCCGGTATCTCGACACTCTGCAATCCCCCCATGACACCCCTagtatatattgtatttattgtgaGATATTTTCCTGCTTCGGTAATATTGCTACCCGCTACACGTCACCCACTCTG

Function

NR:

description
Golgi reassembly-stacking protein 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2403706 True 432 lncRNA 0.53 3 8243554 8245227

Neighbor

gene id symbol gene type direction distance location
LOC110508444 LOC106600443 coding downstream 176853 8062040 ~ 8066701 (-)
LOC110508443 LOC106600051 coding downstream 199545 7993411 ~ 8044009 (-)
LOC110508442 LOC106600049 coding downstream 251031 7988636 ~ 7992523 (-)
LOC110508438 LOC106600038 coding downstream 263336 7883892 ~ 7980218 (-)
LOC110508446 LOC106600062 coding upstream 15929 8261156 ~ 8304991 (-)
LOC110509207 LOC106600069 coding upstream 80668 8324762 ~ 8335344 (-)
LOC110508449 NA coding upstream 112601 8357821 ~ 8383590 (-)
LOC110509208 LOC106600076 coding upstream 163656 8408883 ~ 8422986 (-)
LOC118936616 LOC106600091 coding upstream 235097 8480324 ~ 8522153 (-)
G2101502 NA non-coding downstream 1530 8241680 ~ 8242024 (-)
G2101463 LOC106600054 non-coding downstream 6953 8225599 ~ 8236601 (-)
G2101485 LOC106600054 non-coding downstream 20301 8214641 ~ 8223253 (-)
G2101255 NA non-coding downstream 75936 8167341 ~ 8167618 (-)
G2101225 NA non-coding downstream 98612 8144730 ~ 8144942 (-)
G2101518 NA non-coding upstream 32190 8277417 ~ 8381357 (-)
G2101597 NA non-coding upstream 182178 8427405 ~ 8427632 (-)
G2101599 NA non-coding upstream 183826 8429053 ~ 8429309 (-)
G2101464 NA other downstream 3701 8238144 ~ 8239853 (-)
G2101243 NA other downstream 85036 8158219 ~ 8158518 (-)
LOC110508434 LOC106600027 other downstream 472371 7767544 ~ 7837267 (-)
G2100707 NA other downstream 649739 7593294 ~ 7593815 (-)
LOC110508274 LOC106600446 other upstream 731625 8976699 ~ 8978156 (-)
LOC110508459 LOC106599937 other upstream 933107 9154717 ~ 9180242 (-)
G2102731 sugt1 other upstream 986467 9231694 ~ 9255166 (-)
G2102910 nop9 other upstream 1322739 9567966 ~ 9569051 (-)

Expression


Co-expression Network