G2102112


Basic Information

Item Value
gene id G2102112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 9055019 ~ 9056366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2404401
ATGCACCTGATTGTATTTCCAAACAGTAACATTTTACAAAGACATGTAATACCTAGAGTATATGTTAATCGTTGACGAGATAAAACTAGCTAATACCGTTGTTAATGTGCTCATCCTAAATAAAAAGCCAGCAAGAGCTTGGCACACATACATTCTATCACAAAACGCTCCCCTGCCCATATTTCTGTCTTTGAATATCCCAAACTAGTCCTCAAAGGCAAGCACACACACCAGGAttgaggtcaattccatttcaattccagtttATTCAGAAAGTAAACCCAATTCTAAGTGAACATTTTACTGATTGAAAAGCATTGGAAGAGAATTGGAgttggaatgtcattgtattttctgaattgactggaatttaaatggaattgaccccaaccctgacacacacacacacacacacacacacacagtgatgcttCAGAACTACACTTTATCAGCTCGTTCATTAAGTTTCTCGACTTCCAGACGACATTCAATTTGTCCTGTTTTTATTTGTCGAACTATGCTTCACTATTAACTTACAAGTCTTTGTTGGTGAATATTTGTAGCACTCATTAGTCCTGGTCTACAAAAGCTCAATGGATGGATTACTTCTTTGTGGGAATGGGAGCTGGAGTCCTTCTGGTATAAAGACAAATGGGTAGCCTAGTCCTGAGATGCATATGAGGCAAACTGGAGGTGTCTGGAAATGTGCACGGGAGAGAAAACAGTTTCTAAACTGAAAACAATGGCACCACTGTCGGGATGACacaaaatcaacaacaacaaaaatgtttaaaaaaagaaaaatcagGAGCAGATGAATGTTATTTACAAGGACACGTATGTACAAAAAGTAAACAAAAAAGGGACAAAATGTCTCGTTGTTTCCTCAGTGTTGCAGTGAAACCATCTTCAGCAGCTTCTTCAGCCTCAGGTCAAACCTCAGGTCATAGTTCAAAGGTCAAAGTTTATAGGGTTTATAAAAGTgctgcttttctctctttctctcctcatatTTTCTGTTGTAGTTTTTTGTATGTTGATGTAATTCCTTGTGAAAATCTCATTCTAAAGTGCATGGATGAGGTAAATAAAATTCATTAAAAACAAATTGTTTTAGTTTTGTATCCATTCACTGGCTCAGACGGGAACCATACTGTCTGGCATCTGTTCCTGTATTTGTTGCATGTGGGACAGCAATACCTGCTGCACACTGGCAAGGATCTGGTcctggtgtgatggtgtga

Function

NR:

description
PREDICTED: ephrin type-A receptor 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2404401 True 1244 lncRNA 0.38 2 9055019 9056366

Neighbor

gene id symbol gene type direction distance location
LOC110508456 LOC106600142 coding downstream 59273 8993922 ~ 8995746 (-)
LOC110508274 LOC106600446 coding downstream 76863 8976699 ~ 8978156 (-)
epha4b LOC106600124 coding downstream 144518 8781818 ~ 8910501 (-)
dnah9l LOC102781332 coding downstream 456752 8522163 ~ 8598267 (-)
LOC118936616 LOC106600091 coding downstream 532866 8480324 ~ 8522153 (-)
LOC110508458 LOC105022262 coding upstream 50808 9107174 ~ 9123547 (-)
LOC110508459 LOC106599937 coding upstream 98351 9154717 ~ 9180242 (-)
LOC110508462 lect1 coding upstream 199580 9255946 ~ 9263669 (-)
LOC110508463 LOC106600184 coding upstream 208938 9265304 ~ 9269449 (-)
trnal-caa-108 NA coding upstream 283412 9339778 ~ 9339890 (-)
G2102088 NA non-coding downstream 53172 9001577 ~ 9001847 (-)
G2102087 NA non-coding downstream 53499 9001243 ~ 9001520 (-)
G2102083 LOC106600129 non-coding downstream 61174 8992929 ~ 8993845 (-)
G2102077 NA non-coding downstream 73797 8980992 ~ 8981222 (-)
G2102043 NA non-coding downstream 84609 8965210 ~ 8970410 (-)
G2102729 NA non-coding upstream 73423 9129789 ~ 9143732 (-)
G2102736 NA non-coding upstream 94113 9150479 ~ 9152400 (-)
G2102731 sugt1 non-coding upstream 175328 9231694 ~ 9255166 (-)
si:ch73-71c20.5 LOC103478929 non-coding upstream 391373 9447716 ~ 9453799 (-)
G2102863 LOC106600212 non-coding upstream 416263 9472629 ~ 9474007 (-)
G2101464 NA other downstream 815166 8238144 ~ 8239853 (-)
G2101243 NA other downstream 896501 8158219 ~ 8158518 (-)
LOC110508443 LOC106600051 other downstream 1056154 7993411 ~ 8044009 (-)
G2102910 nop9 other upstream 511600 9567966 ~ 9569051 (-)
G2103015 NA other upstream 720253 9776619 ~ 9776908 (-)
LOC110508473 LOC106600236 other upstream 740128 9739138 ~ 9883971 (-)

Expression


Co-expression Network