G2102910 (nop9)


Basic Information

Item Value
gene id G2102910
gene name nop9
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 9567966 ~ 9569051 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2405308
TTTTTATTTGATCGCGTAGAAAAATCACATTGAAATTCCATTAGAAGACAATTCCCAGCACAATTTCTCACTCCAGAATGTCACTAAAGAGTTTCCTCTTCTTCGATTCACCCGTCTGCACTTCCTGCCACTGGGCCCTCCTTTTCACAAAGTGGGTCAGTGCAAATTTGGCCCAAACGTGACGAGAAAACTGGCCTGATCTAAGCTGTGTCTCACAAGgcaCTAATTCCTTAGCGATGCTCTGTCTCTGGGGGACAGTGGCGCTGTTCCAGACTGCCTCCAACACACGGCTGCCATACCTGGAGCAGGCCATCTGGACATACTGGCCCTCCAGTCTCCTCAGGATCTTTCCCCTCCCCTTATCGCTGGAGGAGGTCACCAGGAGCTGCAGAACGTGGCTGCCTGATTGGTCAGTTCCCAGGGTCAGGTGGTCAGCGGGGGTCAGAGAGCGCAGGCTGTTCAGGAGCAGGGAGCGGTCTTTGAACTTGGCCAGTGACTGGACCAGACGTGAGCCATGGTAACAGATAGAGGATAGGG

Function

symbol description
nop9 Enables RNA binding activity. Predicted to be involved in ribosome biogenesis. Predicted to be part of 90S preribosome and preribosome, small subunit precursor. Predicted to be active in nucleolus.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2405308 True 537 TUCP 0.53 3 9567966 9569051

Neighbor

gene id symbol gene type direction distance location
LOC110508468 LOC106600218 coding downstream 27760 9500029 ~ 9540206 (-)
LOC110508155 mc6zb coding downstream 102878 9454427 ~ 9465088 (-)
si:ch73-71c20.5 LOC103478929 coding downstream 114167 9447716 ~ 9453799 (-)
casp8 casp8 coding downstream 126932 9423413 ~ 9441034 (-)
trnae-cuc-378 NA coding downstream 173332 9394563 ~ 9394634 (-)
LOC110508470 LOC106600228 coding upstream 10199 9579184 ~ 9599623 (-)
LOC110508471 LOC106600234 coding upstream 60093 9629144 ~ 9675219 (-)
LOC110508473 LOC106600236 coding upstream 170087 9739138 ~ 9883971 (-)
LOC110508157 LOC106569426 coding upstream 328722 9897773 ~ 9937313 (-)
LOC110508158 LOC106598039 coding upstream 369922 9938973 ~ 9940505 (-)
G2102903 NA non-coding downstream 20645 9542124 ~ 9547321 (-)
G2102863 LOC106600212 non-coding downstream 93959 9472629 ~ 9474007 (-)
G2102731 sugt1 non-coding downstream 312800 9231694 ~ 9255166 (-)
G2102736 NA non-coding downstream 415566 9150479 ~ 9152400 (-)
G2102992 NA non-coding upstream 153520 9722571 ~ 9727884 (-)
G2103001 NA non-coding upstream 184886 9753937 ~ 9754330 (-)
G2103003 NA non-coding upstream 187964 9757015 ~ 9757233 (-)
G2103004 NA non-coding upstream 188741 9757792 ~ 9758011 (-)
LOC110508459 LOC106599937 other downstream 387816 9154717 ~ 9180242 (-)
LOC110508274 LOC106600446 other downstream 589867 8976699 ~ 8978156 (-)
LOC118936616 LOC106600091 other downstream 1085553 8480324 ~ 8522153 (-)
G2101464 NA other downstream 1328113 8238144 ~ 8239853 (-)
G2103015 NA other upstream 207568 9776619 ~ 9776908 (-)
LOC110508476 LOC106600265 other upstream 435175 10004226 ~ 10007929 (-)
G2103203 LOC106600278 other upstream 544377 10113428 ~ 10115397 (-)
G2103257 NA other upstream 637012 10206063 ~ 10206676 (-)

Expression


Co-expression Network