G2103009



Basic Information


Item Value
gene id G2103009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 9765536 ~ 9765743 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2405409
cgcgcacacgcacacacacacacacatatgagcATGAGCCGTATTTGATGCCGTATTTGACTATTGTGCCATACTGGTTAGTTAATTAATTCCATGCTAAGTCCGTAGCAAAAGGCAATTGTTACAGAGAAAGAATTAGAATTTCAAAAAAGAGTGagtgcaggacaggacaagagaaGGTTGTActaagagatggagagattgggag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2405409 True 208 lncRNA 0.42 1 9765536 9765743

Neighbor


gene id symbol gene type direction distance location
LOC110508471 LOC106600234 coding downstream 90317 9629144 ~ 9675219 (-)
LOC110508470 LOC106600228 coding downstream 165913 9579184 ~ 9599623 (-)
LOC110508468 LOC106600218 coding downstream 225330 9500029 ~ 9540206 (-)
LOC110508155 mc6zb coding downstream 300448 9454427 ~ 9465088 (-)
si:ch73-71c20.5 LOC103478929 coding downstream 311737 9447716 ~ 9453799 (-)
LOC110508157 LOC106569426 coding upstream 132030 9897773 ~ 9937313 (-)
LOC110508158 LOC106598039 coding upstream 173230 9938973 ~ 9940505 (-)
LOC110508476 LOC106600265 coding upstream 238483 10004226 ~ 10007929 (-)
LOC110508478 LOC106600269 coding upstream 265050 10030793 ~ 10041031 (-)
LOC118944863 NA coding upstream 292613 10058349 ~ 10060043 (-)
G2103008 NA non-coding downstream 2277 9762957 ~ 9763259 (-)
G2103004 NA non-coding downstream 7525 9757792 ~ 9758011 (-)
G2103003 NA non-coding downstream 8303 9757015 ~ 9757233 (-)
G2103001 NA non-coding downstream 11206 9753937 ~ 9754330 (-)
G2102992 NA non-coding downstream 37652 9722571 ~ 9727884 (-)
G2103010 NA non-coding upstream 124 9765867 ~ 9766079 (-)
G2103013 NA non-coding upstream 4187 9769930 ~ 9770194 (-)
G2103014 NA non-coding upstream 10563 9776306 ~ 9776543 (-)
G2103017 NA non-coding upstream 16060 9781803 ~ 9782033 (-)
G2103022 NA non-coding upstream 27411 9793154 ~ 9793491 (-)
G2102910 nop9 other downstream 196485 9567966 ~ 9569051 (-)
G2102731 sugt1 other downstream 510370 9231694 ~ 9255166 (-)
LOC110508459 LOC106599937 other downstream 585386 9154717 ~ 9180242 (-)
LOC110508274 LOC106600446 other downstream 787437 8976699 ~ 8978156 (-)
LOC118936616 LOC106600091 other downstream 1283123 8480324 ~ 8522153 (-)
G2103015 NA other upstream 10876 9776619 ~ 9776908 (-)
LOC110508473 LOC106600236 other upstream 30751 9739138 ~ 9883971 (-)
G2103203 LOC106600278 other upstream 347685 10113428 ~ 10115397 (-)
G2103257 NA other upstream 440320 10206063 ~ 10206676 (-)

Expression



Co-expression Network