G2103203 (LOC106600278)


Basic Information

Item Value
gene id G2103203
gene name LOC106600278
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10113428 ~ 10115397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2405613
TCCAGCTCCAGCGCTTTCTGCCTCTCCAGCTCCAGCGCTTTCTGCCTCTCCAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCAAGCGCTTCCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTCCTGCCTCTCTAGCTCCAGCGCTTCCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCTAGCTCCAGCGCTTTCTGCCTCTCCTCCTGTTCCCGCTTCAAAGCTTTCTGCCTAACTAGCTCCAAAGCTTTCTCCTTCTCAACTCGCTCTTGCTCCAAAGCCTTTTCCCTCTCcaactgtTCTCGCTCCaaggctctctctctttcctgtctctctctctccaaggctTTCTCCATCTCCACCCTTTCTTGCTCCAACGCTCTCGCTGTCTCCACCTTTTCTTGTTCAAGAACTTGCTCCCGCTCAAgagccctttccctctcctcccgctCAAAAGCTTtagctctttccctctcctctctctcttgctgcaaAGCTTGCTCTCGTTCCATGGCTCTCTGCCTTTCTAACTCCACAGCTTTCTCAAGCTCAAGGGCCCTCTCTCTTGCCacagacttctctctctcttctgccaaagctttctctctttcctcccgcTCTTGTTCAAGAGCTTGTGCCCTCTCTCGCTCTAAagctctttccctctccttcctttctacCTCCAaggctttctccctctcctccctctcttgctCCATGGCACGCTGTTGCTCAAATATTCTCTGTCTTTCCAGCTCCACGGCTCTAAGTCTCTCTTGCTCAAGGGCcttttctctttcgctctctgccTGCAGCTCCCTTTCCTTGTTTTCTTGTTGCCATGCAGAATCTCTCTCATCCATTATAGTGGGCCTAAGCACACTCACAGGAACTTGACTGTGGGATAGATGGCCTCCAATGACACCCTGGTTGGTAACTGGAACCAGACTGGTGAAGGGCAAACTGGCTGCAGCATTGGCTGTGTGGGTGATGGCAGACACTGTGCCCTCTTGAGGACCTCTACCAGGAAATATTGTTGCAGTTGCAGCATTGTTGTCCTGCCTTTCTGCCTCCCCACGTCCATGCCACCCAACTCCAGAGAAGGCGCCTTCTGATGCCATCTTGCGTGCCAGCAGGGTCAGTGGGCCAGGCTTGCGCTCTGCGTTGCTTTGTGGTTCTGGACTACTACTACGACTGCCACTGCTAGAGGAGCCAGAGCTGGAGGTACTGGAAGTACGCTGCCTAGCCGGGAGCTCACCTGGACTAGGGGGGCTTTGTTTAGGGGTATCAGGCAGTGGGAATGATAActctgggggaggggaggggggaggggtaggCTGTCGAAGCTGCGGAGACAACAGGGGGGGGATGTGCTGTGGGGGTTGGCGGGATCCTTCAGACCTCTCTCTTGCTAGCTGGCCTCTTGGTGGCTCTCCTAGATCCCTCCTCCTGGCACCGCTATCCCAGTCCTCATCCTCGCCATCCTCGTCACCTCCGTCGCTGTCATCATCGCTATCTGCTGGGACTTGGCTAGAGGTTGGGACTCTCTCCGGTCGCTGCTCACCAtcagctacacacacagacagagaagcaACGGCAGTAGGGGCAGAGgtaggagaggtagaggcaggtgGACCAGACACATGGCCGTCTTTGGCCCTGTGTCCCTCTCCCTCGCTTGCGGGGCCTGCTAGTCCCTCTCCCTCGGAGGGGCCAAGTGGCTTGTGCTGGTCAACCAACACGGG

Function

NR:

description
apoptotic chromatin condensation inducer in the nucleus-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2405613 True 1880 TUCP 0.56 3 10113428 10115397

Neighbor

gene id symbol gene type direction distance location
dhrs1 dhrs1 coding downstream 37000 10068866 ~ 10076428 (-)
LOC118944863 NA coding downstream 53385 10058349 ~ 10060043 (-)
LOC110508478 LOC106600269 coding downstream 72397 10030793 ~ 10041031 (-)
LOC110508476 LOC106600265 coding downstream 105499 10004226 ~ 10007929 (-)
LOC110508158 LOC106598039 coding downstream 172923 9938973 ~ 9940505 (-)
mmp14b LOC106600280 coding upstream 37579 10152976 ~ 10174843 (-)
LOC110508484 LOC106600289 coding upstream 62999 10178396 ~ 10195465 (-)
LOC110508487 NA coding upstream 121958 10237355 ~ 10244790 (-)
LOC110508490 LOC106600323 coding upstream 176614 10292011 ~ 10301368 (-)
LOC110508491 LOC106600322 coding upstream 186091 10301488 ~ 10306620 (-)
G2103153 NA non-coding downstream 90788 10022298 ~ 10022640 (-)
G2103148 NA non-coding downstream 95485 10017727 ~ 10017943 (-)
G2103127 NA non-coding downstream 139313 9968699 ~ 9974115 (-)
G2103115 NA non-coding downstream 166125 9947067 ~ 9947303 (-)
G2103229 NA non-coding upstream 60532 10175929 ~ 10176164 (-)
G2103231 NA non-coding upstream 68511 10183908 ~ 10184116 (-)
G2103233 NA non-coding upstream 70594 10185991 ~ 10186191 (-)
G2103234 NA non-coding upstream 72111 10187508 ~ 10187723 (-)
G2103237 NA non-coding upstream 75241 10190638 ~ 10190863 (-)
LOC110508473 LOC106600236 other downstream 301570 9739138 ~ 9883971 (-)
G2103015 NA other downstream 336520 9776619 ~ 9776908 (-)
G2102910 nop9 other downstream 544377 9567966 ~ 9569051 (-)
G2102731 sugt1 other downstream 858262 9231694 ~ 9255166 (-)
G2103257 NA other upstream 90666 10206063 ~ 10206676 (-)
G2103920 NA other upstream 592615 10708012 ~ 10708499 (-)
LOC110508522 NA other upstream 770801 10886198 ~ 10894141 (-)
G2105419 LOC104953893 other upstream 1383729 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 5424371 15539768 ~ 15554897 (-)

Expression


Co-expression Network