Gene
RNA
| Item | Value |
|---|---|
| gene id | G2103625 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 10209564 ~ 10209898 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2406107 | True | 335 | lncRNA | 0.49 | 1 | 10209564 | 10209898 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508484 | LOC106600289 | coding | downstream | 14099 | 10178396 ~ 10195465 (-) |
| mmp14b | LOC106600280 | coding | downstream | 34721 | 10152976 ~ 10174843 (-) |
| dhrs1 | dhrs1 | coding | downstream | 133136 | 10068866 ~ 10076428 (-) |
| LOC118944863 | NA | coding | downstream | 149521 | 10058349 ~ 10060043 (-) |
| LOC110508478 | LOC106600269 | coding | downstream | 168533 | 10030793 ~ 10041031 (-) |
| LOC110508487 | NA | coding | upstream | 27457 | 10237355 ~ 10244790 (-) |
| LOC110508490 | LOC106600323 | coding | upstream | 82113 | 10292011 ~ 10301368 (-) |
| LOC110508491 | LOC106600322 | coding | upstream | 91590 | 10301488 ~ 10306620 (-) |
| LOC110508492 | LOC106600326 | coding | upstream | 96813 | 10306711 ~ 10323084 (-) |
| LOC110508496 | LOC106600349 | coding | upstream | 177455 | 10387353 ~ 10414640 (-) |
| G2103255 | NA | non-coding | downstream | 3662 | 10205588 ~ 10205902 (-) |
| G2103237 | NA | non-coding | downstream | 18701 | 10190638 ~ 10190863 (-) |
| G2103234 | NA | non-coding | downstream | 21841 | 10187508 ~ 10187723 (-) |
| G2103233 | NA | non-coding | downstream | 23373 | 10185991 ~ 10186191 (-) |
| G2103231 | NA | non-coding | downstream | 25448 | 10183908 ~ 10184116 (-) |
| G2103627 | NA | non-coding | upstream | 1833 | 10211731 ~ 10211947 (-) |
| G2103639 | NA | non-coding | upstream | 12399 | 10222297 ~ 10222525 (-) |
| G2103647 | NA | non-coding | upstream | 21464 | 10231362 ~ 10231580 (-) |
| G2103649 | NA | non-coding | upstream | 22920 | 10232818 ~ 10233076 (-) |
| G2103629 | LOC106569449 | non-coding | upstream | 75355 | 10285253 ~ 10287880 (-) |
| G2103257 | NA | other | downstream | 2888 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 94167 | 10113428 ~ 10115397 (-) |
| LOC110508476 | LOC106600265 | other | downstream | 201661 | 10004226 ~ 10007929 (-) |
| LOC110508473 | LOC106600236 | other | downstream | 397706 | 9739138 ~ 9883971 (-) |
| G2103015 | NA | other | downstream | 432656 | 9776619 ~ 9776908 (-) |
| G2103920 | NA | other | upstream | 498114 | 10708012 ~ 10708499 (-) |
| LOC110508522 | NA | other | upstream | 676300 | 10886198 ~ 10894141 (-) |
| G2105419 | LOC104953893 | other | upstream | 1289228 | 11499126 ~ 11500072 (-) |
| G2109663 | LOC106599735 | other | upstream | 5329870 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 5393787 | 15603685 ~ 15604463 (-) |
