Gene
RNA
| Item | Value |
|---|---|
| gene id | G2103647 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 10231362 ~ 10231580 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2406138 | True | 219 | lncRNA | 0.55 | 1 | 10231362 | 10231580 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508484 | LOC106600289 | coding | downstream | 35897 | 10178396 ~ 10195465 (-) |
| mmp14b | LOC106600280 | coding | downstream | 56519 | 10152976 ~ 10174843 (-) |
| dhrs1 | dhrs1 | coding | downstream | 154934 | 10068866 ~ 10076428 (-) |
| LOC118944863 | NA | coding | downstream | 171319 | 10058349 ~ 10060043 (-) |
| LOC110508478 | LOC106600269 | coding | downstream | 190331 | 10030793 ~ 10041031 (-) |
| LOC110508487 | NA | coding | upstream | 5775 | 10237355 ~ 10244790 (-) |
| LOC110508490 | LOC106600323 | coding | upstream | 60431 | 10292011 ~ 10301368 (-) |
| LOC110508491 | LOC106600322 | coding | upstream | 69908 | 10301488 ~ 10306620 (-) |
| LOC110508492 | LOC106600326 | coding | upstream | 75131 | 10306711 ~ 10323084 (-) |
| LOC110508496 | LOC106600349 | coding | upstream | 155773 | 10387353 ~ 10414640 (-) |
| G2103639 | NA | non-coding | downstream | 8837 | 10222297 ~ 10222525 (-) |
| G2103627 | NA | non-coding | downstream | 19415 | 10211731 ~ 10211947 (-) |
| G2103625 | NA | non-coding | downstream | 21464 | 10209564 ~ 10209898 (-) |
| G2103255 | NA | non-coding | downstream | 25460 | 10205588 ~ 10205902 (-) |
| G2103237 | NA | non-coding | downstream | 40499 | 10190638 ~ 10190863 (-) |
| G2103649 | NA | non-coding | upstream | 1238 | 10232818 ~ 10233076 (-) |
| G2103629 | LOC106569449 | non-coding | upstream | 53673 | 10285253 ~ 10287880 (-) |
| G2103695 | NA | non-coding | upstream | 93378 | 10324958 ~ 10325299 (-) |
| G2103707 | NA | non-coding | upstream | 100080 | 10331660 ~ 10339065 (-) |
| G2103696 | LOC106600329 | non-coding | upstream | 110001 | 10341581 ~ 10385478 (-) |
| G2103257 | NA | other | downstream | 24686 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 115965 | 10113428 ~ 10115397 (-) |
| LOC110508476 | LOC106600265 | other | downstream | 223459 | 10004226 ~ 10007929 (-) |
| LOC110508473 | LOC106600236 | other | downstream | 419504 | 9739138 ~ 9883971 (-) |
| G2103015 | NA | other | downstream | 454454 | 9776619 ~ 9776908 (-) |
| G2103920 | NA | other | upstream | 476432 | 10708012 ~ 10708499 (-) |
| LOC110508522 | NA | other | upstream | 654618 | 10886198 ~ 10894141 (-) |
| G2105419 | LOC104953893 | other | upstream | 1267546 | 11499126 ~ 11500072 (-) |
| G2109663 | LOC106599735 | other | upstream | 5308188 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 5372105 | 15603685 ~ 15604463 (-) |
