G2103696 (LOC106600329)


Basic Information

Item Value
gene id G2103696
gene name LOC106600329
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 10341581 ~ 10385478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2406197
CAATTTATTATTATAGTACAACTTAGACCGAGTAGTATAAAAGAGTAATGACATGAAAATCAGGAACATACAAACTCAAGTGgaccattttttttcttcaaatgttCACTCAATCTTTAAAGTTGTTGTCATTGCTTGATTACCAATGCTAGTAAAGCCAATGTGGTGGTTTGACTTGTGGCTCAGGTCAGAGAACAGCCATTTCTGCTCTCTGCTGGTCAAAAGAGCAACAGCAGCACAACAAATCACTTCATAACGCTCACTATCTACATCTCGTTTCAATGTACCTGGCTGCAAGACAATGCTAAATTAATAACACAATGATAGGAGTGGGATGAAACAGGGATGAACTAAATTGCATCAAGAAAAATAAAAAGACCTGTGGGACAATGGAAGGGTGGTAGTGGGGGCAGGTGTTCTCGGAGTGTGTGCATTGACGTTTTCTCACGTTTCGGAGTAGTGTGGGTATTAAAATAGGAGTCGGAGGAGCCACTCGAAGCCATGTGGATGCGTTGTCTGTACAAGTGTGCATCAGTCTGCGTGTGGTCTAAGAGTCCTCATCTCCGTTGACACTGTCACCATCGTCGTCTCCATCCACatgctctccttcctcctcctcctcatcatcatcctcctcctttcTTTGTTGACTCTTCcttcctcctcttcctcatcatcgTCATCCTCGTCAGAGCTGGAGGAGTGGTGGGCGGTGCTACCACTCGGGCGGTTCCTCTTTCTGGCGGCCCGCTTTCCTGCAtccctctcattcactctctctcttctacctccctcgctctctcgctccccttccTCGGTCAGCGAGTAGAGGCCACTGCCGTCCATGCTGtctgtgtcctcctcctcctctccaggcaCCCTTGTAACCTTAGCATCTGGCATTGGCTTGTTCTTAgcctcgtctcctgcctctc

Function

NR:

description
DDB1- and CUL4-associated factor 8-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2406197 True 935 lncRNA 0.48 2 10341581 10385478

Neighbor

gene id symbol gene type direction distance location
LOC110508492 LOC106600326 coding downstream 18497 10306711 ~ 10323084 (-)
LOC110508491 LOC106600322 coding downstream 34961 10301488 ~ 10306620 (-)
LOC110508490 LOC106600323 coding downstream 40213 10292011 ~ 10301368 (-)
LOC110508487 NA coding downstream 96791 10237355 ~ 10244790 (-)
LOC110508484 LOC106600289 coding downstream 146116 10178396 ~ 10195465 (-)
LOC110508496 LOC106600349 coding upstream 1875 10387353 ~ 10414640 (-)
LOC110508497 LOC106600370 coding upstream 33049 10418527 ~ 10463830 (-)
LOC110508159 LOC106600382 coding upstream 119236 10504714 ~ 10508349 (-)
LOC110508501 LOC106600384 coding upstream 149548 10535026 ~ 10540345 (-)
LOC110508509 LOC106600390 coding upstream 292324 10677802 ~ 10681747 (-)
G2103707 NA non-coding downstream 2516 10331660 ~ 10339065 (-)
G2103695 NA non-coding downstream 16282 10324958 ~ 10325299 (-)
G2103629 LOC106569449 non-coding downstream 53701 10285253 ~ 10287880 (-)
G2103649 NA non-coding downstream 108505 10232818 ~ 10233076 (-)
G2103647 NA non-coding downstream 110001 10231362 ~ 10231580 (-)
G2103735 NA non-coding upstream 761 10386239 ~ 10386822 (-)
G2103736 NA non-coding upstream 11307 10396785 ~ 10397069 (-)
G2103756 NA non-coding upstream 77101 10462579 ~ 10518709 (-)
G2103772 NA non-coding upstream 97481 10482959 ~ 10486964 (-)
G2103791 NA non-coding upstream 133741 10519219 ~ 10519469 (-)
G2103257 NA other downstream 134905 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 226184 10113428 ~ 10115397 (-)
LOC110508476 LOC106600265 other downstream 333678 10004226 ~ 10007929 (-)
LOC110508473 LOC106600236 other downstream 529723 9739138 ~ 9883971 (-)
G2103015 NA other downstream 564673 9776619 ~ 9776908 (-)
G2103920 NA other upstream 322534 10708012 ~ 10708499 (-)
LOC110508522 NA other upstream 500720 10886198 ~ 10894141 (-)
G2105419 LOC104953893 other upstream 1113648 11499126 ~ 11500072 (-)
G2109663 LOC106599735 other upstream 5154290 15539768 ~ 15554897 (-)
G2109705 NA other upstream 5218207 15603685 ~ 15604463 (-)

Expression


Co-expression Network